Information for 19-TCCCCTGTCTCTC (Motif 25)

C A G T A G T C A G T C A G T C A G T C A G C T A T C G A C G T A G T C A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G G T C A A C T G C G T A A T G C C T G A A C T G A C T G A C T G A C T G G C T A
p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 21.0bp
Average Position of motif in Background50.1 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCCCCTGTCTCTC-
GTCWGCTGTYYCTCT
 A C G T C A G T A G T C A G T C A G T C A G T C A G C T A T C G A C G T A G T C A C G T A G T C A C G T A G T C A C G T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCCCCTGTCTCTC--
---NCTGTCAATCAN
 C A G T A G T C A G T C A G T C A G T C A G C T A T C G A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCCCCTGTCTCTC-
--GSCTGTCACTCA
 C A G T A G T C A G T C A G T C A G T C A G C T A T C G A C G T A G T C A C G T A G T C A C G T A G T C A C G T
A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCCCCTGTCTCTC
TCCCCA-------
 C A G T A G T C A G T C A G T C A G T C A G C T A T C G A C G T A G T C A C G T A G T C A C G T A G T C
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCCCCTGTCTCTC--
---SCTGTCAVTCAV
 C A G T A G T C A G T C A G T C A G T C A G C T A T C G A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCCCCTGTCTCTC----
----CTGTCTGTCACCT
 C A G T A G T C A G T C A G T C A G T C A G C T A T C G A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCCCCTGTCTCTC
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T C A G T A G T C A G T C A G T C A G T C A G C T A T C G A C G T A G T C A C G T A G T C A C G T A G T C
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCCCCTGTCTCTC-
GAGCCCTTGTCCCTAA
 A C G T A C G T C A G T A G T C A G T C A G T C A G T C A G C T A T C G A C G T A G T C A C G T A G T C A C G T A G T C A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TCCCCTGTCTCTC----
-----TGTCTGDCACCT
 C A G T A G T C A G T C A G T C A G T C A G C T A T C G A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TCCCCTGTCTCTC
-CCCCTCCCCCAC
 C A G T A G T C A G T C A G T C A G T C A G C T A T C G A C G T A G T C A C G T A G T C A C G T A G T C
A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C