Information for 6-GAGCACAGTCTCGCAG (Motif 18)

C T A G G T C A C T A G A T G C C G T A A G T C C T G A A T C G A C G T A T G C A C G T A G T C C T A G A G T C G T C A T A C G
Reverse Opposite:
A G T C A C G T A C T G G A T C T C A G C G T A A T C G T C G A A T G C A G C T A C T G A C G T A T C G A G T C A C G T G A T C
p-value:1e-10
log p-value:-2.508e+01
Information Content per bp:1.698
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 29.9bp
Average Position of motif in Background43.7 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAGCACAGTCTCGCAG
--GCTCGGSCTC----
 C T A G G T C A C T A G A T G C C G T A A G T C C T G A A T C G A C G T A T G C A C G T A G T C C T A G A G T C G T C A T A C G
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGCACAGTCTCGCAG
AGCGGCACACACGCAA--
 A C G T A C G T C T A G G T C A C T A G A T G C C G T A A G T C C T G A A T C G A C G T A T G C A C G T A G T C C T A G A G T C G T C A T A C G
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCACAGTCTCGCAG
NNNNTGAGCACTGTNNG----
 A C G T A C G T A C G T A C G T A C G T C T A G G T C A C T A G A T G C C G T A A G T C C T G A A T C G A C G T A T G C A C G T A G T C C T A G A G T C G T C A T A C G
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAGCACAGTCTCGCAG
GGGAGGACNG--------
 A C G T A C G T C T A G G T C A C T A G A T G C C G T A A G T C C T G A A T C G A C G T A T G C A C G T A G T C C T A G A G T C G T C A T A C G
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GAGCACAGTCTCGCAG
CCAGGAACAG--------
 A C G T A C G T C T A G G T C A C T A G A T G C C G T A A G T C C T G A A T C G A C G T A T G C A C G T A G T C C T A G A G T C G T C A T A C G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GAGCACAGTCTCGCAG--
GGYAGCAYDTGCTDCCCNNN
 A C G T A C G T C T A G G T C A C T A G A T G C C G T A A G T C C T G A A T C G A C G T A T G C A C G T A G T C C T A G A G T C G T C A T A C G A C G T A C G T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GAGCACAGTCTCGCAG
VAGRACAKNCTGTBC-
 C T A G G T C A C T A G A T G C C G T A A G T C C T G A A T C G A C G T A T G C A C G T A G T C C T A G A G T C G T C A T A C G
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GAGCACAGTCTCGCAG
AGCAACAGCCGCACC-
 C T A G G T C A C T A G A T G C C G T A A G T C C T G A A T C G A C G T A T G C A C G T A G T C C T A G A G T C G T C A T A C G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GAGCACAGTCTCGCAG
CAGCC-----------
 C T A G G T C A C T A G A T G C C G T A A G T C C T G A A T C G A C G T A T G C A C G T A G T C C T A G A G T C G T C A T A C G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GAGCACAGTCTCGCAG
AAACCACAGC-------
 A C G T C T A G G T C A C T A G A T G C C G T A A G T C C T G A A T C G A C G T A T G C A C G T A G T C C T A G A G T C G T C A T A C G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T