Information for 13-GGAGAAAATGAAT (Motif 16)

A C T G A C T G C G T A A C T G C T G A C G T A C G T A C G T A A C G T A C T G C G T A C T G A A C G T
Reverse Opposite:
C G T A A G C T A C G T A G T C C G T A C G A T A C G T A C G T A G C T A G T C A C G T A G T C G T A C
p-value:1e-10
log p-value:-2.508e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets80.8 +/- 10.1bp
Average Position of motif in Background60.5 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GGAGAAAATGAAT---
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C T G A C G T A C G T A C G T A A C G T A C T G C G T A C T G A A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGAGAAAATGAAT--
---GAAAGTGAAAGT
 A C T G A C T G C G T A A C T G C T G A C G T A C G T A C G T A A C G T A C T G C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGAGAAAATGAAT
ARGAGGMCAAAATGW--
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C T G A C G T A C G T A C G T A A C G T A C T G C G T A C T G A A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGAGAAAATGAAT---
--AAAAAATCAATAAT
 A C T G A C T G C G T A A C T G C T G A C G T A C G T A C G T A A C G T A C T G C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGAGAAAATGAAT--
---GAAACTGAAACT
 A C T G A C T G C G T A A C T G C T G A C G T A C G T A C G T A A C G T A C T G C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGAGAAAATGAAT----
--GGAAANTGAAACTNA
 A C T G A C T G C G T A A C T G C T G A C G T A C G T A C G T A A C G T A C T G C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGAGAAAATGAAT--
---GAAAMTGAAACT
 A C T G A C T G C G T A A C T G C T G A C G T A C G T A C G T A A C G T A C T G C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

PB0068.1_Sox1_1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGAGAAAATGAAT-----
--NNNTATTGAATTGNNN
 A C T G A C T G C G T A A C T G C T G A C G T A C G T A C G T A A C G T A C T G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGAGAAAATGAAT--
---GRAASTGAAAST
 A C T G A C T G C G T A A C T G C T G A C G T A C G T A C G T A A C G T A C T G C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGAGAAAATGAAT------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C T G A C T G C G T A A C T G C T G A C G T A C G T A C G T A A C G T A C T G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A