Information for 7-AGTGGGAHACTGTGAD (Motif 9)

C G T A A C T G A C G T C T A G A C T G C T A G G T C A G C T A C T G A A T G C C G A T C T A G A C G T A T C G G T C A C A G T
Reverse Opposite:
G C T A A C G T A T G C G T C A A G T C C G T A A T C G A G C T C G A T A C G T A G T C A G T C A G T C C G T A A G T C A C G T
p-value:1e-10
log p-value:-2.322e+01
Information Content per bp:1.773
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.6 +/- 29.5bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AGTGGGAHACTGTGAD
TGCGGAGTGGGACTGG-----
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C T A G A C T G C T A G G T C A G C T A C T G A A T G C C G A T C T A G A C G T A T C G G T C A C A G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T A C G T A C G T A C G T A C G T

PPARG/MA0066.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGTGGGAHACTGTGAD----
AGTAGGTCACNGTGACCTAC
 C G T A A C T G A C G T C T A G A C T G C T A G G T C A G C T A C T G A A T G C C G A T C T A G A C G T A T C G G T C A C A G T A C G T A C G T A C G T A C G T
G C T A A T C G C A G T C T G A C T A G A C T G C A G T A T G C G T C A G A T C T A G C A C T G C A G T A T C G T G C A G A T C A T G C A G C T C G T A A T G C

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGGAHACTGTGAD
NTCAAGTGG-----------
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T C T A G A C T G C T A G G T C A G C T A C T G A A T G C C G A T C T A G A C G T A T C G G T C A C A G T
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGGAHACTGTGAD
NTCAAGTGGN----------
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T C T A G A C T G C T A G G T C A G C T A C T G A A T G C C G A T C T A G A C G T A T C G G T C A C A G T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGGGAHACTGTGAD
NTNNTTAAGTGGNTNAN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C T A G A C T G C T A G G T C A G C T A C T G A A T G C C G A T C T A G A C G T A T C G G T C A C A G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AGTGGGAHACTGTGAD
TTRAGTGSYK---------
 A C G T A C G T A C G T C G T A A C T G A C G T C T A G A C T G C T A G G T C A G C T A C T G A A T G C C G A T C T A G A C G T A T C G G T C A C A G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGGAHACTGTGAD
TTAAGTGGT----------
 A C G T A C G T A C G T C G T A A C T G A C G T C T A G A C T G C T A G G T C A G C T A C T G A A T G C C G A T C T A G A C G T A T C G G T C A C A G T
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.51
Offset:-8
Orientation:reverse strand
Alignment:--------AGTGGGAHACTGTGAD-
CACAAGGGARWARGRCACCATGAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C T A G A C T G C T A G G T C A G C T A C T G A A T G C C G A T C T A G A C G T A T C G G T C A C A G T A C G T
T A G C T G C A G T A C C T G A C T G A T A C G C T A G C T A G C T G A T C A G C G A T T C G A C T G A C T A G T C A G A G T C C G T A A G T C G T A C C T G A C G A T A C T G C T G A C T A G A T C G

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGTGGGAHACTGTGAD--
AANGTGAAGNANNGTNAAGG
 A C G T A C G T C G T A A C T G A C G T C T A G A C T G C T A G G T C A G C T A C T G A A T G C C G A T C T A G A C G T A T C G G T C A C A G T A C G T A C G T
G C T A T C G A C T A G A C T G A C G T C T A G T C G A T C G A C T A G C G T A C T G A T C A G C T A G C T A G C G A T C G T A C G T A C T G A T C A G C T A G

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AGTGGGAHACTGTGAD
-GTGGAT---------
 C G T A A C T G A C G T C T A G A C T G C T A G G T C A G C T A C T G A A T G C C G A T C T A G A C G T A T C G G T C A C A G T
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T