Information for 20-GAGCAGGCTGAGTGGT (Motif 42)

A C T G C G T A A C T G A T G C C G T A A C T G A C T G A G T C A C G T A C T G C G T A C T A G A C G T A C T G C T A G A C G T
Reverse Opposite:
C G T A A G T C A G T C G T C A A G T C A C G T A G T C C G T A C T A G A G T C G T A C A C G T A T C G A G T C A C G T G T A C
p-value:1e-4
log p-value:-1.071e+01
Information Content per bp:1.906
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 29.0bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAGCAGGCTGAGTGGT---
-AGAGTGCTGATTGGTCCA
 A C T G C G T A A C T G A T G C C G T A A C T G A C T G A G T C A C G T A C T G C G T A C T A G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GAGCAGGCTGAGTGGT-
------CTTGAGTGGCT
 A C T G C G T A A C T G A T G C C G T A A C T G A C T G A G T C A C G T A C T G C G T A C T A G A C G T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAGCAGGCTGAGTGGT
---CCTGCTGAGH---
 A C T G C G T A A C T G A T G C C G T A A C T G A C T G A G T C A C G T A C T G C G T A C T A G A C G T A C T G C T A G A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GAGCAGGCTGAGTGGT-
-------TTRAGTGSYK
 A C T G C G T A A C T G A T G C C G T A A C T G A C T G A G T C A C G T A C T G C G T A C T A G A C G T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAGCAGGCTGAGTGGT
----HTGCTGAGTCAT
 A C T G C G T A A C T G A T G C C G T A A C T G A C T G A G T C A C G T A C T G C G T A C T A G A C G T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GAGCAGGCTGAGTGGT------
-------CTGATTGGTCNATTT
 A C T G C G T A A C T G A T G C C G T A A C T G A C T G A G T C A C G T A C T G C G T A C T A G A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GAGCAGGCTGAGTGGT-
-----TGCTGAGTCATC
 A C T G C G T A A C T G A T G C C G T A A C T G A C T G A G T C A C G T A C T G C G T A C T A G A C G T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G G T A C G C A T C A T G G C T A T A C G C G A T G T A C G C T A A G C T A T G C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GAGCAGGCTGAGTGGT-
-------TTGAGTGSTT
 A C T G C G T A A C T G A T G C C G T A A C T G A C T G A G T C A C G T A C T G C G T A C T A G A C G T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GAGCAGGCTGAGTGGT-
-------TTAAGTGCTT
 A C T G C G T A A C T G A T G C C G T A A C T G A C T G A G T C A C G T A C T G C G T A C T A G A C G T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAGCAGGCTGAGTGGT
TCNCCTGCTGNGNNN-
 A C T G C G T A A C T G A T G C C G T A A C T G A C T G A G T C A C G T A C T G C G T A C T A G A C G T A C T G C T A G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T