Information for 10-CTCGGCTATT (Motif 34)

A G T C A C G T A G T C A C T G A C T G A G T C A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A C G A T C G T A A C T G A G T C A G T C A C T G G T C A A C T G
p-value:1e-5
log p-value:-1.201e+01
Information Content per bp:1.947
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.4 +/- 26.3bp
Average Position of motif in Background49.4 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CTCGGCTATT-----
-----CTATTTTTGG
 A G T C A C G T A G T C A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTCGGCTATT------
----KCTATTTTTRGH
 A G T C A C G T A G T C A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTCGGCTATT------
----GCTATTTTTGGM
 A G T C A C G T A G T C A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTCGGCTATT------
----GCTATTTTTAGC
 A G T C A C G T A G T C A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTCGGCTATT
--CAGCTGTT
 A G T C A C G T A G T C A C T G A C T G A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTCGGCTATT------
----GCTATTTATAGC
 A G T C A C G T A G T C A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTCGGCTATT---
GGNGCGNCTGTTNNN
 A C G T A C G T A G T C A C G T A G T C A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTCGGCTATT
---NGCTN--
 A G T C A C G T A G T C A C T G A C T G A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTCGGCTATT--------
---TTCTATTTTTAGNNN
 A G T C A C G T A G T C A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTCGGCTATT---
---GGCCATTAAC
 A G T C A C G T A G T C A C T G A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C