Information for 17-GCCTGTTCATGCGGGA (Motif 30)

C T A G A T G C G T A C A C G T A C T G A C G T A C G T G T A C C G T A A C G T C T A G A G T C C T A G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C C T A G A G T C C G T A A C G T A C T G C G T A C G T A A G T C C G T A A C T G A T C G A G T C
p-value:1e-6
log p-value:-1.474e+01
Information Content per bp:1.910
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.2 +/- 28.3bp
Average Position of motif in Background68.4 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.61
Offset:7
Orientation:forward strand
Alignment:GCCTGTTCATGCGGGA-
-------TATGCGGGTA
 C T A G A T G C G T A C A C G T A C T G A C G T A C G T G T A C C G T A A C G T C T A G A G T C C T A G A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCCTGTTCATGCGGGA----
----NNNNATGCGGGTNNNN
 C T A G A T G C G T A C A C G T A C T G A C G T A C G T G T A C C G T A A C G T C T A G A G T C C T A G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GCCTGTTCATGCGGGA--
-------CATGCGGGTAC
 C T A G A T G C G T A C A C G T A C T G A C G T A C G T G T A C C G T A A C G T C T A G A G T C C T A G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCCTGTTCATGCGGGA
--CTGTTCCTGG----
 C T A G A T G C G T A C A C G T A C T G A C G T A C G T G T A C C G T A A C G T C T A G A G T C C T A G A C T G A C T G C G T A
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:9
Orientation:forward strand
Alignment:GCCTGTTCATGCGGGA---
---------GGCGGGAARN
 C T A G A T G C G T A C A C G T A C T G A C G T A C G T G T A C C G T A A C G T C T A G A G T C C T A G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GCCTGTTCATGCGGGA-
-------CWGGCGGGAA
 C T A G A T G C G T A C A C G T A C T G A C G T A C G T G T A C C G T A A C G T C T A G A G T C C T A G A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GCCTGTTCATGCGGGA---
--------GGGCGGGAAGG
 C T A G A T G C G T A C A C G T A C T G A C G T A C G T G T A C C G T A A C G T C T A G A G T C C T A G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GCCTGTTCATGCGGGA---
--------GGGCGGGAAGG
 C T A G A T G C G T A C A C G T A C T G A C G T A C G T G T A C C G T A A C G T C T A G A G T C C T A G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

FOXL1/MA0033.2/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCCTGTTCATGCGGGA
---TGTTTAC------
 C T A G A T G C G T A C A C G T A C T G A C G T A C G T G T A C C G T A A C G T C T A G A G T C C T A G A C T G A C T G C G T A
A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCCTGTTCATGCGGGA-
---AANTCATGCGTGAA
 C T A G A T G C G T A C A C G T A C T G A C G T A C G T G T A C C G T A A C G T C T A G A G T C C T A G A C T G A C T G C G T A A C G T
A C G T A C G T A C G T G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A