Information for 13-WSCAMMACAAMAT (Motif 26)

C G T A A T C G A G T C C G T A G T C A G T A C C G T A A G T C C G T A C G T A G T A C C G T A C G A T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T G A T C G C G A T
p-value:1e-7
log p-value:-1.680e+01
Information Content per bp:1.839
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.0 +/- 22.0bp
Average Position of motif in Background36.1 +/- 39.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--WSCAMMACAAMAT-
ATATCAAAACAAAACA
 A C G T A C G T C G T A A T C G A G T C C G T A G T C A G T A C C G T A A G T C C G T A C G T A G T A C C G T A C G A T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:WSCAMMACAAMAT--
CAAACAACAACACCT
 C G T A A T C G A G T C C G T A G T C A G T A C C G T A A G T C C G T A C G T A G T A C C G T A C G A T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---WSCAMMACAAMAT-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T C G T A A T C G A G T C C G T A G T C A G T A C C G T A A G T C C G T A C G T A G T A C C G T A C G A T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--WSCAMMACAAMAT
ATGTCACAACAACAC
 A C G T A C G T C G T A A T C G A G T C C G T A G T C A G T A C C G T A A G T C C G T A C G T A G T A C C G T A C G A T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:WSCAMMACAAMAT--
---AAACAAACATTC
 C G T A A T C G A G T C C G T A G T C A G T A C C G T A A G T C C G T A C G T A G T A C C G T A C G A T A C G T A C G T
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:WSCAMMACAAMAT
---RNAACAATGG
 C G T A A T C G A G T C C G T A G T C A G T A C C G T A A G T C C G T A C G T A G T A C C G T A C G A T
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---WSCAMMACAAMAT
ATTTGCATAACAAAG-
 A C G T A C G T A C G T C G T A A T C G A G T C C G T A G T C A G T A C C G T A A G T C C G T A C G T A G T A C C G T A C G A T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:WSCAMMACAAMAT
NWAACCACADNN-
 C G T A A T C G A G T C C G T A G T C A G T A C C G T A A G T C C G T A C G T A G T A C C G T A C G A T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:WSCAMMACAAMAT
-----AACAAT--
 C G T A A T C G A G T C C G T A G T C A G T A C C G T A A G T C C G T A C G T A G T A C C G T A C G A T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:WSCAMMACAAMAT
--GTAAACAAT--
 C G T A A T C G A G T C C G T A G T C A G T A C C G T A A G T C C G T A C G T A G T A C C G T A C G A T
A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T