Information for 12-GTAATGATAATAAGGG (Motif 21)

C T A G C G A T C T G A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C T G A G T C A C T A G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C A G T A G C T C G T A A C G T A C G T C G T A C G A T A G T C C G T A A C G T A G C T C G T A A G T C
p-value:1e-7
log p-value:-1.682e+01
Information Content per bp:1.907
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.3 +/- 27.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0064.1_Sox14_1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTAATGATAATAAGGG
GCTAATTATAATTATC-
 A C G T C T A G C G A T C T G A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C T G A G T C A C T A G A C T G A C T G
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTAATGATAATAAGGG
TATAATTATAATATTC-
 A C G T C T A G C G A T C T G A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C T G A G T C A C T A G A C T G A C T G
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTAATGATAATAAGGG
--WATGCAAATGAG--
 C T A G C G A T C T G A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C T G A G T C A C T A G A C T G A C T G
A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTAATGATAATAAGGG
TTTAATTATAATTAAG-
 A C G T C T A G C G A T C T G A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C T G A G T C A C T A G A C T G A C T G
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTAATGATAATAAGGG---
--AAACATAATGAGGTTGC
 C T A G C G A T C T G A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C T G A G T C A C T A G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PB0174.1_Sox30_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTAATGATAATAAGGG
TAAGATTATAATACGG-
 A C G T C T A G C G A T C T G A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C T G A G T C A C T A G A C T G A C T G
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTAATGATAATAAGGG---
--GACGATAATGAGCTTGC
 C T A G C G A T C T G A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C T G A G T C A C T A G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTAATGATAATAAGGG
--TATGCWAATBAV--
 C T A G C G A T C T G A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C T G A G T C A C T A G A C T G A C T G
A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTAATGATAATAAGGG
-TAATGATGATCACTA
 C T A G C G A T C T G A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C T G A G T C A C T A G A C T G A C T G
A C G T C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

POU1F1/MA0784.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTAATGATAATAAGGG
AATATGCAAATTAG--
 C T A G C G A T C T G A C G T A A C G T A C T G C G T A A C G T C G T A C G T A A C G T C T G A G T C A C T A G A C T G A C T G
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T