Information for 11-CACCACCCAGAGGGGG (Motif 20)

A T G C C T G A A T G C A G T C C G T A A G T C A G T C A T G C C G T A A T C G C G T A T A C G A C T G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C A T G C A C G T A T G C A C G T A T C G A C T G A C T G A C G T A C T G A T C G A G C T A T C G
p-value:1e-7
log p-value:-1.682e+01
Information Content per bp:1.906
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.4 +/- 23.1bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0102.1_Zic2_1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CACCACCCAGAGGGGG
-ACCCCCCCGGGGGGN
 A T G C C T G A A T G C A G T C C G T A A G T C A G T C A T G C C G T A A T C G C G T A T A C G A C T G A C T G A C T G A C T G
A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACCACCCAGAGGGGG
GGACCACCCACG-----
 A C G T A T G C C T G A A T G C A G T C C G T A A G T C A G T C A T G C C G T A A T C G C G T A T A C G A C T G A C T G A C T G A C T G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CACCACCCAGAGGGGG
-NCCCCCCCGGGGGGN
 A T G C C T G A A T G C A G T C C G T A A G T C A G T C A T G C C G T A A T C G C G T A T A C G A C T G A C T G A C T G A C T G
A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CACCACCCAGAGGGGG-
---CACCCCCGGGGGGG
 A T G C C T G A A T G C A G T C C G T A A G T C A G T C A T G C C G T A A T C G C G T A T A C G A C T G A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CACCACCCAGAGGGGG---
----NCGCAGCGGGGGGTC
 A T G C C T G A A T G C A G T C C G T A A G T C A G T C A T G C C G T A A T C G C G T A T A C G A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CACCACCCAGAGGGGG---
-----CACAGCGGGGGGTC
 A T G C C T G A A T G C A G T C C G T A A G T C A G T C A T G C C G T A A T C G C G T A T A C G A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CACCACCCAGAGGGGG---
----NCNCAGCGGGGGGTC
 A T G C C T G A A T G C A G T C C G T A A G T C A G T C A T G C C G T A A T C G C G T A T A C G A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZBTB7C/MA0695.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACCACCCAGAGGGGG
GCGACCACCGAA------
 A C G T A C G T A T G C C T G A A T G C A G T C C G T A A G T C A G T C A T G C C G T A A T C G C G T A T A C G A C T G A C T G A C T G A C T G
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CACCACCCAGAGGGGG--------
----GCCASCAGGGGGCGCYVNNG
 A T G C C T G A A T G C A G T C C G T A A G T C A G T C A T G C C G T A A T C G C G T A T A C G A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CACCACCCAGAGGGGG---
----DCHCAGCAGGRGGCC
 A T G C C T G A A T G C A G T C C G T A A G T C A G T C A T G C C G T A A T C G C G T A T A C G A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C