Information for 6-GCAGGTATTTGCA (Motif 16)

A C T G A G T C C G T A A C T G C T A G A G C T G T C A A C G T C G A T C G A T A C T G A T G C C G T A
Reverse Opposite:
C G A T A T C G A G T C C G T A C G T A G T C A C A G T C T G A A G T C A G T C C G A T A C T G A G T C
p-value:1e-8
log p-value:-1.976e+01
Information Content per bp:1.772
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.08%
Number of Background Sequences with motif17.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets48.3 +/- 27.1bp
Average Position of motif in Background50.0 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAGGTATTTGCA
VCAGGTRDRY---
 A C T G A G T C C G T A A C T G C T A G A G C T G T C A A C G T C G A T C G A T A C T G A T G C C G T A
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCAGGTATTTGCA
GCAGTGATTT---
 A C T G A G T C C G T A A C T G C T A G A G C T G T C A A C G T C G A T C G A T A C T G A T G C C G T A
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCAGGTATTTGCA
AACAGGTGT-----
 A C G T A C T G A G T C C G T A A C T G C T A G A G C T G T C A A C G T C G A T C G A T A C T G A T G C C G T A
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGTATTTGCA
SDGCAGGTGCNS---
 A C G T A C G T A C T G A G T C C G T A A C T G C T A G A G C T G T C A A C G T C G A T C G A T A C T G A T G C C G T A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTATTTGCA
TGCTGTGATTT---
 A C G T A C T G A G T C C G T A A C T G C T A G A G C T G T C A A C G T C G A T C G A T A C T G A T G C C G T A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTATTTGCA
NNCAGGTGTN----
 A C G T A C T G A G T C C G T A A C T G C T A G A G C T G T C A A C G T C G A T C G A T A C T G A T G C C G T A
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCAGGTATTTGCA---
------ATTTGCATAA
 A C T G A G T C C G T A A C T G C T A G A G C T G T C A A C G T C G A T C G A T A C T G A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GCAGGTATTTGCA---
------ATTTGCATAT
 A C T G A G T C C G T A A C T G C T A G A G C T G T C A A C G T C G A T C G A T A C T G A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCAGGTATTTGCA---
---TTCATTTGCATAT
 A C T G A G T C C G T A A C T G C T A G A G C T G T C A A C G T C G A T C G A T A C T G A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTATTTGCA
NNCAGGTGNN----
 A C G T A C T G A G T C C G T A A C T G C T A G A G C T G T C A A C G T C G A T C G A T A C T G A T G C C G T A
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T