Information for 10-CAGCCAACMTCYTMWC (Motif 15)

A G T C C G T A A C T G A G T C A G T C C G T A G C T A T A G C T G C A A G C T A T G C G A T C A G C T G T A C C G A T A G T C
Reverse Opposite:
C T A G G C T A C A G T C T G A C T A G A T C G T C G A A C G T A C T G C G A T C G A T A C T G C T A G G T A C C G A T A C T G
p-value:1e-8
log p-value:-2.011e+01
Information Content per bp:1.636
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif6.15%
Number of Background Sequences with motif164.2
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets57.3 +/- 24.2bp
Average Position of motif in Background51.1 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCAACMTCYTMWC
BCAGACWA---------
 A C G T A G T C C G T A A C T G A G T C A G T C C G T A G C T A T A G C T G C A A G C T A T G C G A T C A G C T G T A C C G A T A G T C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGCCAACMTCYTMWC
-TGCCAA---------
 A G T C C G T A A C T G A G T C A G T C C G T A G C T A T A G C T G C A A G C T A T G C G A T C A G C T G T A C C G A T A G T C
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAGCCAACMTCYTMWC
CGTGCCAAG--------
 A C G T A G T C C G T A A C T G A G T C A G T C C G T A G C T A T A G C T G C A A G C T A T G C G A T C A G C T G T A C C G A T A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCCAACMTCYTMWC
ACTAGCCAATCA------
 A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A G C T A T A G C T G C A A G C T A T G C G A T C A G C T G T A C C G A T A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGCCAACMTCYTMWC
CAGCC-----------
 A G T C C G T A A C T G A G T C A G T C C G T A G C T A T A G C T G C A A G C T A T G C G A T C A G C T G T A C C G A T A G T C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCAACMTCYTMWC
CACAGN------------
 A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A G C T A T A G C T G C A A G C T A T G C G A T C A G C T G T A C C G A T A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGCCAACMTCYTMWC
-AGCCAATCGG-----
 A G T C C G T A A C T G A G T C A G T C C G T A G C T A T A G C T G C A A G C T A T G C G A T C A G C T G T A C C G A T A G T C
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCAACMTCYTMWC
CCAGACAG---------
 A C G T A G T C C G T A A C T G A G T C A G T C C G T A G C T A T A G C T G C A A G C T A T G C G A T C A G C T G T A C C G A T A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGCCAACMTCYTMWC
TCAGTCTT---------
 A C G T A G T C C G T A A C T G A G T C A G T C C G T A G C T A T A G C T G C A A G C T A T G C G A T C A G C T G T A C C G A T A G T C
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CAGCCAACMTCYTMWC
CAAATCCAGACATCACA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A G C T A T A G C T G C A A G C T A T G C G A T C A G C T G T A C C G A T A G T C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T A C G T A C G T