Information for 9-GTTNACAACCACACGA (Motif 14)

A C T G C G A T A C G T A C G T T C G A G A T C G T C A C T G A G A T C G A T C G T C A G A T C G T C A A G T C T A C G G T C A
Reverse Opposite:
A C G T A G T C C T A G A C G T C T A G A C G T C A T G C T A G A G C T A C G T C A T G A C G T C G T A G T C A C G T A A G T C
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.652
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.9 +/- 19.4bp
Average Position of motif in Background60.8 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GTTNACAACCACACGA
----NWAACCACADNN
 A C T G C G A T A C G T A C G T T C G A G A T C G T C A C T G A G A T C G A T C G T C A G A T C G T C A A G T C T A C G G T C A
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GTTNACAACCACACGA
-----AAACCACANN-
 A C T G C G A T A C G T A C G T T C G A G A T C G T C A C T G A G A T C G A T C G T C A G A T C G T C A A G T C T A C G G T C A
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GTTNACAACCACACGA
-----AAACCACAGC-
 A C T G C G A T A C G T A C G T T C G A G A T C G T C A C T G A G A T C G A T C G T C A G A T C G T C A A G T C T A C G G T C A
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GTTNACAACCACACGA
----NAAACCACAG--
 A C T G C G A T A C G T A C G T T C G A G A T C G T C A C T G A G A T C G A T C G T C A G A T C G T C A A G T C T A C G G T C A
A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTTNACAACCACACGA
-CAAACAACAACACCT
 A C T G C G A T A C G T A C G T T C G A G A T C G T C A C T G A G A T C G A T C G T C A G A T C G T C A A G T C T A C G G T C A
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GTTNACAACCACACGA
-----AAACCACAGAN
 A C T G C G A T A C G T A C G T T C G A G A T C G T C A C T G A G A T C G A T C G T C A G A T C G T C A A G T C T A C G G T C A
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTTNACAACCACACGA
ATGTCACAACAACAC--
 A C G T A C T G C G A T A C G T A C G T T C G A G A T C G T C A C T G A G A T C G A T C G T C A G A T C G T C A A G T C T A C G G T C A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GTTNACAACCACACGA----
----CGAAGCACACAAAATA
 A C T G C G A T A C G T A C G T T C G A G A T C G T C A C T G A G A T C G A T C G T C A G A T C G T C A A G T C T A C G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GTTNACAACCACACGA
ATATCAAAACAAAACA-
 A C G T A C T G C G A T A C G T A C G T T C G A G A T C G T C A C T G A G A T C G A T C G T C A G A T C G T C A A G T C T A C G G T C A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GTTNACAACCACACGA
NNNTAACAATTATAN--
 A C G T A C T G C G A T A C G T A C G T T C G A G A T C G T C A C T G A G A T C G A T C G T C A G A T C G T C A A G T C T A C G G T C A
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T