Information for 1-AGDTGTTAATACG (Motif 1)

C G T A A C T G C G T A A C G T C T A G A C G T A C G T C G T A C T G A A G C T C T G A A T G C C T A G
Reverse Opposite:
A G T C T A C G A G C T C T G A A G C T A C G T C G T A G T C A A G T C C G T A G A C T A G T C A C G T
p-value:1e-12
log p-value:-2.985e+01
Information Content per bp:1.779
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.4 +/- 31.0bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AGDTGTTAATACG
AGGTGTTAAT---
 C G T A A C T G C G T A A C G T C T A G A C G T A C G T C G T A C T G A A G C T C T G A A T G C C T A G
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGDTGTTAATACG
AAGGTGTKAA----
 A C G T C G T A A C T G C G T A A C G T C T A G A C G T A C G T C G T A C T G A A G C T C T G A A T G C C T A G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGDTGTTAATACG
AGGTGTGA-----
 C G T A A C T G C G T A A C G T C T A G A C G T A C G T C G T A C T G A A G C T C T G A A T G C C T A G
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGDTGTTAATACG
AGGTGTCA-----
 C G T A A C T G C G T A A C G T C T A G A C G T A C G T C G T A C T G A A G C T C T G A A T G C C T A G
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGDTGTTAATACG
AAGGTGTGAAA---
 A C G T C G T A A C T G C G T A A C G T C T A G A C G T A C G T C G T A C T G A A G C T C T G A A T G C C T A G
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGDTGTTAATACG
AGGTGTGA-----
 C G T A A C T G C G T A A C G T C T A G A C G T A C G T C G T A C T G A A G C T C T G A A T G C C T A G
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGDTGTTAATACG
AGGTGTGAAA---
 C G T A A C T G C G T A A C G T C T A G A C G T A C G T C G T A C T G A A G C T C T G A A T G C C T A G
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGDTGTTAATACG
AAGGTGTGAA----
 A C G T C G T A A C T G C G T A A C G T C T A G A C G T A C G T C G T A C T G A A G C T C T G A A T G C C T A G
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGDTGTTAATACG
AGGTGTGA-----
 C G T A A C T G C G T A A C G T C T A G A C G T A C G T C G T A C T G A A G C T C T G A A T G C C T A G
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGDTGTTAATACG
TAGGTGTGAAG---
 A C G T C G T A A C T G C G T A A C G T C T A G A C G T A C G T C G T A C T G A A G C T C T G A A T G C C T A G
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T