Information for 8-CMCAAACCCACMA (Motif 9)

A G T C G T A C G T A C G T C A C G T A C G T A A T G C A G T C A G T C C G T A G T A C G T C A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G A T C T A G A C T G A T C G A C G T A C G T A C G T A C T G A C T G A C T G
p-value:1e-10
log p-value:-2.403e+01
Information Content per bp:1.866
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets40.6 +/- 18.5bp
Average Position of motif in Background64.5 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CMCAAACCCACMA-
----AAACCACANN
 A G T C G T A C G T A C G T C A C G T A C G T A A T G C A G T C A G T C C G T A G T A C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CMCAAACCCACMA--
----AAACCACAGAN
 A G T C G T A C G T A C G T C A C G T A C G T A A T G C A G T C A G T C C G T A G T A C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CMCAAACCCACMA-
--SSAATCCACANN
 A G T C G T A C G T A C G T C A C G T A C G T A A T G C A G T C A G T C C G T A G T A C G T C A C G T A A C G T
A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

RREB1/MA0073.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CMCAAACCCACMA------
CCCCAAACCACCCCCCCCCA
 A C G T A G T C G T A C G T A C G T C A C G T A C G T A A T G C A G T C A G T C C G T A G T A C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CMCAAACCCACMA
-TCCAATCCACA-
 A G T C G T A C G T A C G T C A C G T A C G T A A T G C A G T C A G T C C G T A G T A C G T C A C G T A
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CMCAAACCCACMA--
---NWAACCACADNN
 A G T C G T A C G T A C G T C A C G T A C G T A A T G C A G T C A G T C C G T A G T A C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CMCAAACCCACMA
---NAAACCACAG
 A G T C G T A C G T A C G T C A C G T A C G T A A T G C A G T C A G T C C G T A G T A C G T C A C G T A
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CMCAAACCCACMA-
----AAACCGCAAA
 A G T C G T A C G T A C G T C A C G T A C G T A A T G C A G T C A G T C C G T A G T A C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CMCAAACCCACMA
GCCACRCCCACY-
 A G T C G T A C G T A C G T C A C G T A C G T A A T G C A G T C A G T C C G T A G T A C G T C A C G T A
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CMCAAACCCACMA
GCCACACCCA---
 A G T C G T A C G T A C G T C A C G T A C G T A A T G C A G T C A G T C C G T A G T A C G T C A C G T A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T