Information for 15-GCCAATTCTC (Motif 29)

A C T G A G T C A G T C C T G A C T G A A C G T A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A C G T A A G C T G A C T A C T G A C T G G T A C
p-value:1e-6
log p-value:-1.581e+01
Information Content per bp:1.904
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets38.0 +/- 25.2bp
Average Position of motif in Background37.1 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCCAATTCTC------
-NNAATTCTCGNTNAN
 A C T G A G T C A G T C C T G A C T G A A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCCAATTCTC------
-AGTATTCTCGGTTGC
 A C T G A G T C A G T C C T G A C T G A A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCAATTCTC
TGCCAA-----
 A C G T A C T G A G T C A G T C C T G A C T G A A C G T A C G T A G T C A C G T A G T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCAATTCTC-
NNGCACCTTTCTCC
 A C G T A C G T A C G T A C T G A G T C A G T C C T G A C T G A A C G T A C G T A G T C A C G T A G T C A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCAATTCTC----
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A C T G A G T C A G T C C T G A C T G A A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCCAATTCTC
CGTGCCAAG----
 A C G T A C G T A C G T A C T G A G T C A G T C C T G A C T G A A C G T A C G T A G T C A C G T A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

HESX1/MA0894.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCAATTCTC
NCCAATTANC
 A C T G A G T C A G T C C T G A C T G A A C G T A C G T A G T C A C G T A G T C
C T A G A G T C G A T C C T G A G T C A A G C T G A C T G C T A C T A G A G T C

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCAATTCTC
GGTGCCAAGT---
 A C G T A C G T A C G T A C T G A G T C A G T C C T G A C T G A A C G T A C G T A G T C A C G T A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCAATTCTC
-CCAATTAA-
 A C T G A G T C A G T C C T G A C T G A A C G T A C G T A G T C A C G T A G T C
A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GCCAATTCTC
NNCNNAACAATTNT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C T G A C T G A A C G T A C G T A G T C A C G T A G T C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T