Information for 19-ATTTAAAAAGABA (Motif 28)

G T C A A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A A T C G C G T A A C G T C T G A
Reverse Opposite:
A G C T T C G A C G A T A T G C A G C T A C G T A C G T A C G T A C G T G T C A C G T A G T C A A C G T
p-value:1e-6
log p-value:-1.583e+01
Information Content per bp:1.840
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets48.7 +/- 27.4bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATTTAAAAAGABA
NATTCAAAT-----
 A C G T G T C A A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A A T C G C G T A A C G T C T G A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATTTAAAAAGABA-
ATGCTAAAAATAGAA
 A C G T G T C A A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A A T C G C G T A A C G T C T G A A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATTTAAAAAGABA----
GTTAAAAAAAAAAATTA
 G T C A A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A A T C G C G T A A C G T C T G A A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATTTAAAAAGABA
AATATTAATAAAGA--
 A C G T A C G T A C G T G T C A A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A A T C G C G T A A C G T C T G A
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ATTTAAAAAGABA
-TCTAAAAATAGA
 G T C A A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A A T C G C G T A A C G T C T G A
A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATTTAAAAAGABA---
WNAGTCADAVTGAAACTN
 A C G T A C G T G T C A A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A A T C G C G T A A C G T C T G A A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATTTAAAAAGABA
CAAAAGTAAACAAAG-
 A C G T A C G T A C G T G T C A A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A A T C G C G T A A C G T C T G A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATTTAAAAAGABA
-DCYAAAAATAGM
 G T C A A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A A T C G C G T A A C G T C T G A
A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATTTAAAAAGABA
CGGTTTCAAA------
 A C G T A C G T A C G T G T C A A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A A T C G C G T A A C G T C T G A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATTTAAAAAGABA
TACTGGAAAAAAAA
 A C G T G T C A A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A A T C G C G T A A C G T C T G A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A