Information for 17-TGTTGATCCCCTT (Motif 26)

A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C T G A C T G A C T G C G T A A C G T A G T C C G T A C G T A A G T C C G T A
p-value:1e-6
log p-value:-1.587e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets52.2 +/- 22.1bp
Average Position of motif in Background45.6 +/- 2.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0121.1_Obox1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGATCCCCTT--
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGATCCCCTT--
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0123.1_Obox3/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGATCCCCTT--
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0122.1_Obox2/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGATCCCCTT--
ATAGTTAATCCCCCTCA
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGATCCCCTT--
AATNTTGATACCCTATN
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGATCCCCTT--
ANANNTGATACCCNATN
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

Crx/MA0467.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGTTGATCCCCTT
--CTAATCCTCTT
 A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PH0015.1_Crx/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGATCCCCTT--
AGGCTAATCCCCAANG
 A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGTTGATCCCCTT
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

PH0165.1_Six6_1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGATCCCCTT--
ANANNTGATACCCTATN
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T