Information for 13-AGAATCRGTGTCT (Motif 20)

G C T A C T A G C G T A T G C A G C A T A T G C T C G A A C T G C A G T A T C G A G C T G T A C A G C T
Reverse Opposite:
C T G A C A T G C T G A A T G C G T C A T A G C A G C T A T C G C G T A A C G T C G A T A G T C C A G T
p-value:1e-8
log p-value:-1.927e+01
Information Content per bp:1.683
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets74.4 +/- 16.8bp
Average Position of motif in Background52.3 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGAATCRGTGTCT
CAAATCACTG---
 G C T A C T A G C G T A T G C A G C A T A T G C T C G A A C T G C A G T A T C G A G C T G T A C A G C T
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGAATCRGTGTCT
-----CTTTGT--
 G C T A C T A G C G T A T G C A G C A T A T G C T C G A A C T G C A G T A T C G A G C T G T A C A G C T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGAATCRGTGTCT
-AAATCACTGC--
 G C T A C T A G C G T A T G C A G C A T A T G C T C G A A C T G C A G T A T C G A G C T G T A C A G C T
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGAATCRGTGTCT-
----CCATTGTTTT
 G C T A C T A G C G T A T G C A G C A T A T G C T C G A A C T G C A G T A T C G A G C T G T A C A G C T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAATCRGTGTCT
-AAATCACAGCA-
 G C T A C T A G C G T A T G C A G C A T A T G C T C G A A C T G C A G T A T C G A G C T G T A C A G C T
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGAATCRGTGTCT-
TWGHWACAWTGTWDC
 A C G T G C T A C T A G C G T A T G C A G C A T A T G C T C G A A C T G C A G T A T C G A G C T G T A C A G C T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGAATCRGTGTCT-
YDGHTACAWTGTADC
 A C G T G C T A C T A G C G T A T G C A G C A T A T G C T C G A A C T G C A G T A T C G A G C T G T A C A G C T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

PH0126.1_Obox6/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGAATCRGTGTCT
CNATAATCCGNTTNT
 A C G T A C G T G C T A C T A G C G T A T G C A G C A T A T G C T C G A A C T G C A G T A T C G A G C T G T A C A G C T
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGAATCRGTGTCT
AGGVNCCTTTGT--
 A C G T G C T A C T A G C G T A T G C A G C A T A T G C T C G A A C T G C A G T A T C G A G C T G T A C A G C T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AGAATCRGTGTCT--
-----VBSYGTCTGG
 G C T A C T A G C G T A T G C A G C A T A T G C T C G A A C T G C A G T A T C G A G C T G T A C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G