Information for 2-GGAATTGTAG (Motif 2)

A C T G A C T G G T C A C G T A A C G T A C G T A C T G A C G T C G T A A T C G
Reverse Opposite:
A T G C A C G T C G T A A G T C C G T A T C G A A C G T A C G T A G T C A G T C
p-value:1e-16
log p-value:-3.725e+01
Information Content per bp:1.885
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets39.7 +/- 32.2bp
Average Position of motif in Background70.9 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTGTAG-
GGGAATTGTAGT
 A C G T A C T G A C T G G T C A C G T A A C G T A C G T A C T G A C G T C G T A A T C G A C G T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.69
Offset:-8
Orientation:reverse strand
Alignment:--------GGAATTGTAG--
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T C A C G T A A C G T A C G T A C T G A C G T C G T A A T C G A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.68
Offset:-8
Orientation:reverse strand
Alignment:--------GGAATTGTAG--
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T C A C G T A A C G T A C G T A C T G A C G T C G T A A T C G A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGAATTGTAG-
-CCATTGTTNY
 A C T G A C T G G T C A C G T A A C G T A C G T A C T G A C G T C G T A A T C G A C G T
A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGAATTGTAG--
GGGATTGCATNN
 A C T G A C T G G T C A C G T A A C G T A C G T A C T G A C G T C G T A A T C G A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGAATTGTAG----
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C T G A C T G G T C A C G T A A C G T A C G T A C T G A C G T C G T A A T C G A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGAATTGTAG
---ATTGTT-
 A C T G A C T G G T C A C G T A A C G T A C G T A C T G A C G T C G T A A T C G
A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGAATTGTAG
--CTTTGT--
 A C T G A C T G G T C A C G T A A C G T A C G T A C T G A C G T C G T A A T C G
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGAATTGTAG----
AAAATTGTTATGAA
 A C T G A C T G G T C A C G T A A C G T A C G T A C T G A C G T C G T A A T C G A C G T A C G T A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGAATTGTAG-----
AATCAATTGTTCCGCTA
 A C G T A C G T A C T G A C T G G T C A C G T A A C G T A C G T A C T G A C G T C G T A A T C G A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A