Information for 12-AATATATAYATAC (Motif 18)

G C T A C T G A A C G T C G T A A G C T C G T A A C G T C G T A A G C T C T G A C G A T C T G A G A T C
Reverse Opposite:
C T A G A G C T C G T A A G C T C T A G A C G T C G T A A C G T C T G A A C G T C G T A A G C T C G A T
p-value:1e-8
log p-value:-1.987e+01
Information Content per bp:1.801
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.9 +/- 24.4bp
Average Position of motif in Background37.0 +/- 0.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:AATATATAYATAC-
TGTATATATATACC
 G C T A C T G A A C G T C G T A A G C T C G T A A C G T C G T A A G C T C T G A C G A T C T G A G A T C A C G T
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

PB0080.1_Tbp_1/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--AATATATAYATAC-
TCTTTATATATAAATA
 A C G T A C G T G C T A C T G A A C G T C G T A A G C T C G T A A C G T C G T A A G C T C T G A C G A T C T G A G A T C A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AATATATAYATAC
-ATATTTACATA-
 G C T A C T G A A C G T C G T A A G C T C G T A A C G T C G T A A G C T C T G A C G A T C T G A G A T C
A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AATATATAYATAC
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A C G T G C T A C T G A A C G T C G T A A G C T C G T A A C G T C G T A A G C T C T G A C G A T C T G A G A T C
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AATATATAYATAC
YATGCATATRCATRT
 A C G T A C G T G C T A C T G A A C G T C G T A A G C T C G T A A C G T C G T A A G C T C T G A C G A T C T G A G A T C
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AATATATAYATAC
-ATATTTACATA-
 G C T A C T G A A C G T C G T A A G C T C G T A A C G T C G T A A G C T C T G A C G A T C T G A G A T C
A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AATATATAYATAC
-GHATATKCAT--
 G C T A C T G A A C G T C G T A A G C T C G T A A C G T C G T A A G C T C T G A C G A T C T G A G A T C
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------AATATATAYATAC
NNNNNNCTTTTATAN----
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A A C G T C G T A A G C T C G T A A C G T C G T A A G C T C T G A C G A T C T G A G A T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------AATATATAYATAC
NNNNNNCTTTTATAN----
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A A C G T C G T A A G C T C G T A A C G T C G T A A G C T C T G A C G A T C T G A G A T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AATATATAYATAC
WWATRTAAACAN--
 A C G T G C T A C T G A A C G T C G T A A G C T C G T A A C G T C G T A A G C T C T G A C G A T C T G A G A T C
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T