Information for 1-TAAATTCGGC (Motif 1)

A G C T C G T A C T G A C T G A A C G T A C G T A T G C C T A G C T A G A G T C
Reverse Opposite:
C T A G G A T C A G T C T A C G G T C A G T C A A G C T A G C T G C A T T C G A
p-value:1e-17
log p-value:-4.067e+01
Information Content per bp:1.733
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.55%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets41.0 +/- 29.8bp
Average Position of motif in Background59.7 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TAAATTCGGC--
NNNNTGAATTCANNNC
 A C G T A C G T A C G T A C G T A G C T C G T A C T G A C T G A A C G T A C G T A T G C C T A G C T A G A G T C A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

PAX4/MA0068.2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAAATTCGGC
CTAATTAG--
 A G C T C G T A C T G A C T G A A C G T A C G T A T G C C T A G C T A G A G T C
A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G A C G T A C G T

RAX2/MA0717.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAAATTCGGC
NTAATTGG--
 A G C T C G T A C T G A C T G A A C G T A C G T A T G C C T A G C T A G A G T C
A G C T C G A T T C G A C T G A C A G T A G C T C T A G T C A G A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAAATTCGGC
NNTAATTAGA-
 A C G T A G C T C G T A C T G A C T G A A C G T A C G T A T G C C T A G C T A G A G T C
A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A A C G T

MSX2/MA0708.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAAATTCGGC
NTAATTGG--
 A G C T C G T A C T G A C T G A A C G T A C G T A T G C C T A G C T A G A G T C
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T

Shox2/MA0720.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAAATTCGGC
NTAATTAG--
 A G C T C G T A C T G A C T G A A C G T A C G T A T G C C T A G C T A G A G T C
A G C T C G A T G T C A C G T A C A G T C G A T C T G A T C A G A C G T A C G T

ISX/MA0654.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAAATTCGGC
NTAATTAG--
 A G C T C G T A C T G A C T G A A C G T A C G T A T G C C T A G C T A G A G T C
A G C T C G A T G T C A C G T A C A G T C A G T C T G A T C A G A C G T A C G T

UNCX/MA0721.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAAATTCGGC
NTAATTAN--
 A G C T C G T A C T G A C T G A A C G T A C G T A T G C C T A G C T A G A G T C
A G C T C G A T C T G A C T G A C A G T G A C T C T G A T C A G A C G T A C G T

PRRX1/MA0716.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAAATTCGGC
NTAATTAN--
 A G C T C G T A C T G A C T G A A C G T A C G T A T G C C T A G C T A G A G T C
A G C T C G A T C T G A C T G A C A G T A G C T C T G A T C A G A C G T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TAAATTCGGC
CACTAATT----
 A C G T A C G T A G C T C G T A C T G A C T G A A C G T A C G T A T G C C T A G C T A G A G T C
G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T