Information for 10-CCTTGCATGC (Motif 13)

A G T C A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G C T A C T G A G T C C G T A C G T A A C T G A C T G
p-value:1e-7
log p-value:-1.665e+01
Information Content per bp:1.967
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.3 +/- 26.0bp
Average Position of motif in Background27.2 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CCTTGCATGC--
--TTGCGTGCVA
 A G T C A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCTTGCATGC----
CCATTGTATGCAAAT
 A C G T A G T C A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGCATGC
NNACTTGCCTT-
 A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGCATGC
BNTGDCCTTG-----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGCATGC
TGACCTTGAN---
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A G T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCTTGCATGC
---TGCGTG-
 A G T C A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A G T C
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGCATGC
TGACCTTGAV---
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A G T C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------CCTTGCATGC
NNNNATGACCTTGANTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A G T C
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTTGCATGC
CCWGGAATGY
 A G T C A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A G T C
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGCATGC
GGGATTGCATNN
 A C G T A C G T A G T C A G T C A C G T A C G T A C T G A G T C C T G A A C G T A C T G A G T C
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T