Information for 9-ATTGGCTGGC (Motif 11)

C T G A A C G T A G C T A T C G C A T G T A G C C A G T T C A G A C T G A T G C
Reverse Opposite:
T A C G T G A C A G T C G T C A A T C G G T A C T A G C T C G A T G C A G A C T
p-value:1e-8
log p-value:-1.958e+01
Information Content per bp:1.663
Number of Target Sequences with motif81.0
Percentage of Target Sequences with motif9.22%
Number of Background Sequences with motif2080.2
Percentage of Background Sequences with motif4.56%
Average Position of motif in Targets53.2 +/- 24.7bp
Average Position of motif in Background49.4 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---ATTGGCTGGC
CCGATTGGCT---
 A C G T A C G T A C G T C T G A A C G T A G C T A T C G C A T G T A G C C A G T T C A G A C T G A T G C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:ATTGGCTGGC
-TWGTCTGV-
 C T G A A C G T A G C T A T C G C A T G T A G C C A G T T C A G A C T G A T G C
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ATTGGCTGGC
TGATTGGCTANN
 A C G T A C G T C T G A A C G T A G C T A T C G C A T G T A G C C A G T T C A G A C T G A T G C
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ATTGGCTGGC
-TTGGCA---
 C T G A A C G T A G C T A T C G C A T G T A G C C A G T T C A G A C T G A T G C
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ATTGGCTGGC
NTTGGCANN-
 C T G A A C G T A G C T A T C G C A T G T A G C C A G T T C A G A C T G A T G C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATTGGCTGGC-----
NGTAGGTTGGCATNNN
 A C G T C T G A A C G T A G C T A T C G C A T G T A G C C A G T T C A G A C T G A T G C A C G T A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTGGCTGGC--
CTGATTGGTCNATTT
 A C G T A C G T A C G T C T G A A C G T A G C T A T C G C A T G T A G C C A G T T C A G A C T G A T G C A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTGGCTGGC----
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T C T G A A C G T A G C T A T C G C A T G T A G C C A G T T C A G A C T G A T G C A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATTGGCTGGC--
---GGTTGGCAT
 C T G A A C G T A G C T A T C G C A T G T A G C C A G T T C A G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATTGGCTGGC
-CTGTCTGG-
 C T G A A C G T A G C T A T C G C A T G T A G C C A G T T C A G A C T G A T G C
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T