Information for 2-CGGTCTGCCT (Motif 2)

A G T C A C T G A C T G A C G T A G T C C A G T C T A G A G T C A G T C A C G T
Reverse Opposite:
C G T A C T A G A C T G A G T C G T C A T A C G C G T A A G T C A G T C A C T G
p-value:1e-11
log p-value:-2.750e+01
Information Content per bp:1.886
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif35.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets53.4 +/- 24.1bp
Average Position of motif in Background46.5 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGGTCTGCCT
CTGTCTGG--
 A G T C A C T G A C T G A C G T A G T C C A G T C T A G A G T C A G T C A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGGTCTGCCT
VBSYGTCTGG--
 A C G T A C G T A G T C A C T G A C T G A C G T A G T C C A G T C T A G A G T C A G T C A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGGTCTGCCT-
-GGTCTGGCAT
 A G T C A C T G A C T G A C G T A G T C C A G T C T A G A G T C A G T C A C G T A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGGTCTGCCT-
-GCTCGGSCTC
 A G T C A C T G A C T G A C G T A G T C C A G T C T A G A G T C A G T C A C G T A C G T
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CGGTCTGCCT
TTGCGGTTT----
 A C G T A C G T A C G T A G T C A C T G A C T G A C G T A G T C C A G T C T A G A G T C A G T C A C G T
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGGTCTGCCT---
CTGTCTGTCACCT
 A G T C A C T G A C T G A C G T A G T C C A G T C T A G A G T C A G T C A C G T A C G T A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CGGTCTGCCT---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A G T C C A G T C T A G A G T C A G T C A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CGGTCTGCCT
NTGGGTGTGGCC
 A C G T A C G T A G T C A C T G A C T G A C G T A G T C C A G T C T A G A G T C A G T C A C G T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CGGTCTGCCT
TTTGCGGTTT----
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A G T C C A G T C T A G A G T C A G T C A C G T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CGGTCTGCCT--
--CTGTTCCTGG
 A G T C A C T G A C T G A C G T A G T C C A G T C T A G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G