Information for 10-AGGGATCTTTCCC (Motif 17)

C G T A A C T G A C T G A C T G C G T A G C A T G T A C A C G T A C G T A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A G T C A C G T A A C T G C G T A A C G T A G T C A G T C A G T C C G A T
p-value:1e-5
log p-value:-1.345e+01
Information Content per bp:1.931
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.3 +/- 15.2bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGGATCTTTCCC
NGGGGATTTCCC-
 C G T A A C T G A C T G A C T G C G T A G C A T G T A C A C G T A C G T A C G T A G T C A G T C A G T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGGGATCTTTCCC
--GGGGATTTCC-
 C G T A A C T G A C T G A C T G C G T A G C A T G T A C A C G T A C G T A C G T A G T C A G T C A G T C
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGGGATCTTTCCC
--GGGGATTTCC-
 C G T A A C T G A C T G A C T G C G T A G C A T G T A C A C G T A C G T A C G T A G T C A G T C A G T C
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGGGATCTTTCCC
--GGGAATTTCC-
 C G T A A C T G A C T G A C T G C G T A G C A T G T A C A C G T A C G T A C G T A G T C A G T C A G T C
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGGGATCTTTCCC
--GGGAATTTCC-
 C G T A A C T G A C T G A C T G C G T A G C A T G T A C A C G T A C G T A C G T A G T C A G T C A G T C
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.59
Offset:6
Orientation:forward strand
Alignment:AGGGATCTTTCCC---
------HTTTCCCASG
 C G T A A C T G A C T G A C T G C G T A G C A T G T A C A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGGGATCTTTCCC--
-----ATTTTCCATT
 C G T A A C T G A C T G A C T G C G T A G C A T G T A C A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AGGGATCTTTCCC--
-----ATTTTCCATT
 C G T A A C T G A C T G A C T G C G T A G C A T G T A C A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGGGATCTTTCCC-
--TGACCTTTNCNT
 C G T A A C T G A C T G A C T G C G T A G C A T G T A C A C G T A C G T A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGGGATCTTTCCC----
-----ACTTTCACTTTC
 C G T A A C T G A C T G A C T G C G T A G C A T G T A C A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C