Information for 5-CTAGCCGCGG (Motif 15)

T A G C A C G T C G T A A C T G A G T C T A G C A T C G A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A T G C A T C G C T A G A G T C C G A T C G T A A T C G
p-value:1e-7
log p-value:-1.789e+01
Information Content per bp:1.842
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif243.2
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets47.6 +/- 26.7bp
Average Position of motif in Background47.6 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTAGCCGCGG-
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C G T T A G C A C G T C G T A A C T G A G T C T A G C A T C G A G T C A C T G A C T G A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTAGCCGCGG-
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T T A G C A C G T C G T A A C T G A G T C T A G C A T C G A G T C A C T G A C T G A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTAGCCGCGG-----
NTNGCCTCAGGCNNN
 T A G C A C G T C G T A A C T G A G T C T A G C A T C G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------CTAGCCGCGG-----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A C G T C G T A A C T G A G T C T A G C A T C G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTAGCCGCGG
-CAGCC----
 T A G C A C G T C G T A A C T G A G T C T A G C A T C G A G T C A C T G A C T G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTAGCCGCGG---
ACATGCCCGGGCAT
 A C G T T A G C A C G T C G T A A C T G A G T C T A G C A T C G A G T C A C T G A C T G A C G T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTAGCCGCGG
---GCTCCG-
 T A G C A C G T C G T A A C T G A G T C T A G C A T C G A G T C A C T G A C T G
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTAGCCGCGG-----
ATTGCCTCAGGCAAT
 T A G C A C G T C G T A A C T G A G T C T A G C A T C G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTAGCCGCGG-----
NTCGCCTCAGGCAAT
 T A G C A C G T C G T A A C T G A G T C T A G C A T C G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTAGCCGCGG-----
NTCCCCTCAGGGANT
 T A G C A C G T C G T A A C T G A G T C T A G C A T C G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T