Information for 6-TGCAGCCACTGGA (Motif 9)

A G C T A C T G A G T C G T C A A C T G A G T C A G T C T C G A A G T C A C G T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C T G A G T C A C G T A C T G A G T C C T G A
p-value:1e-10
log p-value:-2.440e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.4 +/- 26.7bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0171.1_Nkx2-1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCAGCCACTGGA----
-TAAGCCACTTGAAATT
 A G C T A C T G A G T C G T C A A C T G A G T C A G T C T C G A A G T C A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGCAGCCACTGGA-----
-ATAACCACTTGAAAATT
 A G C T A C T G A G T C G T C A A C T G A G T C A G T C T C G A A G T C A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGCAGCCACTGGA-----
--CAATCACTGGCAGAAT
 A G C T A C T G A G T C G T C A A C T G A G T C A G T C T C G A A G T C A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGCAGCCACTGGA----
-TAAGCCACTTGAAATT
 A G C T A C T G A G T C G T C A A C T G A G T C A G T C T C G A A G T C A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGCAGCCACTGGA----
-TAAGCCACTTGAATTT
 A G C T A C T G A G T C G T C A A C T G A G T C A G T C T C G A A G T C A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGCAGCCACTGGA-----
-AATCGCACTGCATTCCG
 A G C T A C T G A G T C G T C A A C T G A G T C A G T C T C G A A G T C A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGCAGCCACTGGA-
----NSCACTYVAV
 A G C T A C T G A G T C G T C A A C T G A G T C A G T C T C G A A G T C A C G T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGCAGCCACTGGA-
-----CCACTTGAA
 A G C T A C T G A G T C G T C A A C T G A G T C A G T C T C G A A G T C A C G T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PH0115.1_Nkx2-6/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGCAGCCACTGGA----
-TAAGCCACTTAACATT
 A G C T A C T G A G T C G T C A A C T G A G T C A G T C T C G A A G T C A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGCAGCCACTGGA-
----ACCACTTGAA
 A G C T A C T G A G T C G T C A A C T G A G T C A G T C T C G A A G T C A C G T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A