Information for 2-TGTCTGCGGA (Motif 7)

A C G T A C T G C G A T T A G C C G A T A T C G A G T C C T A G C T A G C T G A
Reverse Opposite:
A G C T A G T C A G T C T C A G A T G C C G T A A C T G G C T A A G T C T G C A
p-value:1e-11
log p-value:-2.535e+01
Information Content per bp:1.832
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif119.3
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets44.1 +/- 19.6bp
Average Position of motif in Background48.0 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TGTCTGCGGA
VBSYGTCTGG---
 A C G T A C G T A C G T A C G T A C T G C G A T T A G C C G A T A T C G A G T C C T A G C T A G C T G A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGTCTGCGGA
CTGTCTGG---
 A C G T A C G T A C T G C G A T T A G C C G A T A T C G A G T C C T A G C T A G C T G A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGTCTGCGGA
TWGTCTGV---
 A C G T A C G T A C T G C G A T T A G C C G A T A T C G A G T C C T A G C T A G C T G A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCTGCGGA--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T T A G C C G A T A T C G A G T C C T A G C T A G C T G A A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGTCTGCGGA--
TGTCAGGGGGCG
 A C G T A C T G C G A T T A G C C G A T A T C G A G T C C T A G C T A G C T G A A C G T A C G T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGTCTGCGGA-
CCATTGTATGCAAAT
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T T A G C C G A T A T C G A G T C C T A G C T A G C T G A A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCTGCGGA-
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T T A G C C G A T A T C G A G T C C T A G C T A G C T G A A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

HINFP/MA0131.2/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGTCTGCGGA-----
---NCGCGGACGTTG
 A C G T A C T G C G A T T A G C C G A T A T C G A G T C C T A G C T A G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGTCTGCGGA-
-TTCTNMGGAA
 A C G T A C T G C G A T T A G C C G A T A T C G A G T C C T A G C T A G C T G A A C G T
A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGTCTGCGGA--
-GTCAGCANNTN
 A C G T A C T G C G A T T A G C C G A T A T C G A G T C C T A G C T A G C T G A A C G T A C G T
A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T