Information for 1-CCGCCATCTT (Motif 6)

G A T C G T A C C T A G A T G C A T G C T C G A G A C T A G T C A G C T A G C T
Reverse Opposite:
T C G A T C G A T C A G C T G A A G C T T A C G T A C G G A T C C A T G C T A G
p-value:1e-11
log p-value:-2.537e+01
Information Content per bp:1.650
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif5.67%
Number of Background Sequences with motif906.3
Percentage of Background Sequences with motif1.93%
Average Position of motif in Targets49.3 +/- 23.8bp
Average Position of motif in Background51.3 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCATCTT-
GCCGCCATCTTG
 A C G T G A T C G T A C C T A G A T G C A T G C T C G A G A C T A G T C A G C T A G C T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCATCTT-
GCNGCCATCTTG
 A C G T G A T C G T A C C T A G A T G C A T G C T C G A G A C T A G T C A G C T A G C T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CCGCCATCTT
GTCCGCCATTA-
 A C G T A C G T G A T C G T A C C T A G A T G C A T G C T C G A G A C T A G T C A G C T A G C T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------CCGCCATCTT-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C C T A G A T G C A T G C T C G A G A C T A G T C A G C T A G C T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCGCCATCTT---
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T G A T C G T A C C T A G A T G C A T G C T C G A G A C T A G T C A G C T A G C T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCGCCATCTT--
--GCCATCTGTT
 G A T C G T A C C T A G A T G C A T G C T C G A G A C T A G T C A G C T A G C T A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCGCCATCTT
TTTCCCGCCMAV--
 A C G T A C G T A C G T A C G T G A T C G T A C C T A G A T G C A T G C T C G A G A C T A G T C A G C T A G C T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCATCTT
GCTCCGCCCMCY-
 A C G T A C G T A C G T G A T C G T A C C T A G A T G C A T G C T C G A G A C T A G T C A G C T A G C T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCGCCATCTT--
GCCCCGCCCCCTCCC
 A C G T A C G T A C G T G A T C G T A C C T A G A T G C A T G C T C G A G A C T A G T C A G C T A G C T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Atf3/MA0605.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCGCCATCTT
ACGTCATC--
 G A T C G T A C C T A G A T G C A T G C T C G A G A C T A G T C A G C T A G C T
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T