Information for 10-GCTGCTGCTCCTC (Motif 16)

A C T G A G T C A C G T A T C G A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G G T C A A C T G T C A G C G T A A C T G T G A C C G T A A C T G A T G C C G T A A C T G T G A C
p-value:1e-7
log p-value:-1.802e+01
Information Content per bp:1.885
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif30.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets43.7 +/- 18.0bp
Average Position of motif in Background49.5 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCTGCTCCTC-
AGATGCTRCTRCCHT
 A C G T A C T G A G T C A C G T A T C G A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C G T A G T C A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCTGCTGCTCCTC
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T C G A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C G T A G T C
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTGCTGCTCCTC
AGCAGCTGCT----
 A C G T A C T G A G T C A C G T A T C G A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C G T A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTGCTGCTCCTC
AGCAGCTGCTNN--
 A C G T A C T G A G T C A C G T A T C G A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C G T A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCTGCTGCTCCTC
--CNGTCCTCCC-
 A C T G A G T C A C G T A T C G A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C G T A G T C
A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTGCTGCTCCTC
TGCAGCTGTCCCT-
 A C G T A C T G A G T C A C G T A T C G A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C G T A G T C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCTGCTGCTCCTC
CGCAGCTGCG----
 A C G T A C T G A G T C A C G T A T C G A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C G T A G T C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTGCTGCTCCTC
-CAGCTGNT----
 A C T G A G T C A C G T A T C G A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C G T A G T C
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTGCTGCTCCTC
--TKCTGTTCCA-
 A C T G A G T C A C G T A T C G A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C G T A G T C
A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTGCTGCTCCTC
NCAGCTGCTG---
 A C T G A G T C A C G T A T C G A G T C A C G T A C T G A G T C A C G T A G T C A G T C A C G T A G T C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T