Information for 1-GCGGGATCGCGTC (Motif 1)

A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C T G A G T C A C T G A G C T A G T C
Reverse Opposite:
A C T G C T G A A G T C A C T G A G T C A C T G G T C A A C G T A G T C A G T C A G T C A C T G G T A C
p-value:1e-12
log p-value:-2.833e+01
Information Content per bp:1.946
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.9 +/- 24.4bp
Average Position of motif in Background52.1 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCGGGATCGCGTC
GGGCGGGACC-----
 A C G T A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C T G A G T C A C T G A G C T A G T C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCGGGATCGCGTC
GGCGGGAARN----
 A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C T G A G T C A C T G A G C T A G T C
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCGGGATCGCGTC
GGGCGGGAAGG----
 A C G T A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C T G A G T C A C T G A G C T A G T C
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCGGGATCGCGTC
GGGCGGGAAGG----
 A C G T A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C T G A G T C A C T G A G C T A G T C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCGGGATCGCGTC
BTKGGCGGGAAA-----
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C T G A G T C A C T G A G C T A G T C
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCGGGATCGCGTC
CWGGCGGGAA------
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C T G A G T C A C T G A G C T A G T C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCGGGATCGCGTC
TGGCGGGAAAHB---
 A C G T A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C T G A G T C A C T G A G C T A G T C
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCGGGATCGCGTC
NGCTGCGATATCGNCGC
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C T G A G T C A C T G A G C T A G T C
G T A C C T A G T A G C A C G T T A C G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A G T C T A G C T A C G G T A C

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCGGGATCGCGTC
GGCGGGAAAH----
 A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C T G A G T C A C T G A G C T A G T C
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCGGGATCGCGTC
ANTGCGGGGGCGGN--
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A G T C A C T G A G T C A C T G A G C T A G T C
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T