Information for 5-CAAAACCCTGCAGAAC (Motif 9)

A G T C C G T A C G T A C T G A G T C A A G T C A G T C A G T C G A C T A C T G G T A C C T G A A C T G G T C A C T G A A G T C
Reverse Opposite:
A C T G A G C T A C G T A G T C A G C T A C T G A G T C C G T A A C T G A C T G A C T G A C G T A G C T A C G T C G A T A C T G
p-value:1e-10
log p-value:-2.433e+01
Information Content per bp:1.906
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.0 +/- 12.6bp
Average Position of motif in Background53.8 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAAAACCCTGCAGAAC
-AAATCACAGCA----
 A G T C C G T A C G T A C T G A G T C A A G T C A G T C A G T C G A C T A C T G G T A C C T G A A C T G G T C A C T G A A G T C
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAAAACCCTGCAGAAC
-AAATCACTGC-----
 A G T C C G T A C G T A C T G A G T C A A G T C A G T C A G T C G A C T A C T G G T A C C T G A A C T G G T C A C T G A A G T C
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CAAAACCCTGCAGAAC
------CCTGCTGAGH
 A G T C C G T A C G T A C T G A G T C A A G T C A G T C A G T C G A C T A C T G G T A C C T G A A C T G G T C A C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAAAACCCTGCAGAAC
---CCCCCTGCTGTG-
 A G T C C G T A C G T A C T G A G T C A A G T C A G T C A G T C G A C T A C T G G T A C C T G A A C T G G T C A C T G A A G T C
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAAAACCCTGCAGAAC
-GGCCYCCTGCTGDGH
 A G T C C G T A C G T A C T G A G T C A A G T C A G T C A G T C G A C T A C T G G T A C C T G A A C T G G T C A C T G A A G T C
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CAAAACCCTGCAGAAC---
TCAGCACCATGGACAGCTCC
 A C G T A G T C C G T A C G T A C T G A G T C A A G T C A G T C A G T C G A C T A C T G G T A C C T G A A C T G G T C A C T G A A G T C A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:7
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CAAAACCCTGCAGAAC---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C C G T A C G T A C T G A G T C A A G T C A G T C A G T C G A C T A C T G G T A C C T G A A C T G G T C A C T G A A G T C A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CAAAACCCTGCAGAAC
-AAGACCCYYN-----
 A G T C C G T A C G T A C T G A G T C A A G T C A G T C A G T C G A C T A C T G G T A C C T G A A C T G G T C A C T G A A G T C
A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T A C G T A C G T

ELF4/MA0641.1/Jaspar

Match Rank:9
Score:0.48
Offset:3
Orientation:forward strand
Alignment:CAAAACCCTGCAGAAC
---AACCCGGAAGTG-
 A G T C C G T A C G T A C T G A G T C A A G T C A G T C A G T C G A C T A C T G G T A C C T G A A C T G G T C A C T G A A G T C
A C G T A C G T A C G T C G T A G C T A G T A C T A G C T G A C C T A G A C T G C G T A G T C A T C A G A G C T C T A G A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CAAAACCCTGCAGAAC
CAAATCACTG------
 A G T C C G T A C G T A C T G A G T C A A G T C A G T C A G T C G A C T A C T G G T A C C T G A A C T G G T C A C T G A A G T C
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T