Information for 5-TGAGKTGGGCGGC (Motif 5)

C G A T A C T G C T G A A C T G A C G T A C G T C A T G A T C G A C T G A G T C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C T A G A G T C A T G C G T A C G T C A G T C A A G T C A G C T G T A C C G T A
p-value:1e-11
log p-value:-2.680e+01
Information Content per bp:1.804
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif94.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets47.6 +/- 24.3bp
Average Position of motif in Background49.6 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGAGKTGGGCGGC
TGGGTGTGGC---
 C G A T A C T G C T G A A C T G A C G T A C G T C A T G A T C G A C T G A G T C A C T G A C T G A G T C
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGAGKTGGGCGGC-----
-NAGANTGGCGGGGNGNA
 C G A T A C T G C T G A A C T G A C G T A C G T C A T G A T C G A C T G A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGAGKTGGGCGGC
NNGCNCTGCGCGGC
 A C G T C G A T A C T G C T G A A C T G A C G T A C G T C A T G A T C G A C T G A G T C A C T G A C T G A G T C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Klf4/MA0039.2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGAGKTGGGCGGC
TGGGTGGGGC---
 C G A T A C T G C T G A A C T G A C G T A C G T C A T G A T C G A C T G A G T C A C T G A C T G A G T C
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGAGKTGGGCGGC-
--GGGGGCGGGGCC
 C G A T A C T G C T G A A C T G A C G T A C G T C A T G A T C G A C T G A G T C A C T G A C T G A G T C A C G T
A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGAGKTGGGCGGC---
NNTNAGGGGCGGNNNN
 C G A T A C T G C T G A A C T G A C G T A C G T C A T G A T C G A C T G A G T C A C T G A C T G A G T C A C G T A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------TGAGKTGGGCGGC
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T G A A C T G A C G T A C G T C A T G A T C G A C T G A G T C A C T G A C T G A G T C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGAGKTGGGCGGC-----
-NNNNTTGGCGCCGANNN
 C G A T A C T G C T G A A C T G A C G T A C G T C A T G A T C G A C T G A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGAGKTGGGCGGC-----
-NNNNTTGGCGCCGANNN
 C G A T A C T G C T G A A C T G A C G T A C G T C A T G A T C G A C T G A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGAGKTGGGCGGC---
----BTKGGCGGGAAA
 C G A T A C T G C T G A A C T G A C G T A C G T C A T G A T C G A C T G A G T C A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A