Information for 18-CCTCAHAGGGCAC (Motif 24)

A G T C A G T C A C G T A G T C C G T A G A C T C G T A A C T G C T A G A C T G A G T C G T C A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C A G T C A G T C C G A T C A G T A C G T A C T G C G T A A C T G C T A G
p-value:1e-6
log p-value:-1.606e+01
Information Content per bp:1.872
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 29.6bp
Average Position of motif in Background37.8 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCTCAHAGGGCAC----
-NNNNTTGGGCACNNCN
 A G T C A G T C A C G T A G T C C G T A G A C T C G T A A C T G C T A G A C T G A G T C G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CCTCAHAGGGCAC
---CAAAGGTCAG
 A G T C A G T C A C G T A G T C C G T A G A C T C G T A A C T G C T A G A C T G A G T C G T C A A G T C
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTCAHAGGGCAC---
TCTCAAAGGTCACCTG
 A G T C A G T C A C G T A G T C C G T A G A C T C G T A A C T G C T A G A C T G A G T C G T C A A G T C A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTCAHAGGGCAC---
TCTCAAAGGTCACGAG
 A G T C A G T C A C G T A G T C C G T A G A C T C G T A A C T G C T A G A C T G A G T C G T C A A G T C A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCTCAHAGGGCAC
----NGTGGGCAT
 A G T C A G T C A C G T A G T C C G T A G A C T C G T A A C T G C T A G A C T G A G T C G T C A A G T C
A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCTCAHAGGGCAC
ACWTCAAAGG----
 A C G T A G T C A G T C A C G T A G T C C G T A G A C T C G T A A C T G C T A G A C T G A G T C G T C A A G T C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCTCAHAGGGCAC
GAGGTCAAAGGTCA-
 A C G T A C G T A G T C A G T C A C G T A G T C C G T A G A C T C G T A A C T G C T A G A C T G A G T C G T C A A G T C
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCTCAHAGGGCAC
ACATCAAAGG----
 A C G T A G T C A G T C A C G T A G T C C G T A G A C T C G T A A C T G C T A G A C T G A G T C G T C A A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCTCAHAGGGCAC
TGCCCNNAGGGCA-
 A C G T A G T C A G T C A C G T A G T C C G T A G A C T C G T A A C T G C T A G A C T G A G T C G T C A A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CCTCAHAGGGCAC
-----AAGGTCAC
 A G T C A G T C A C G T A G T C C G T A G A C T C G T A A C T G C T A G A C T G A G T C G T C A A G T C
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C