Information for 14-CTCCCTGACTGAC (Motif 18)

A G T C A C G T A G T C A G T C A G T C C G A T A C T G C G T A A G T C A C G T A T C G C T G A A G T C
Reverse Opposite:
C T A G A G C T A T G C C G T A A C T G A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C T G
p-value:1e-8
log p-value:-2.044e+01
Information Content per bp:1.932
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.2 +/- 23.1bp
Average Position of motif in Background44.1 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTCCCTGACTGAC---
----BTGABTGACAGS
 A G T C A C G T A G T C A G T C A G T C C G A T A C T G C G T A A G T C A C G T A T C G C T G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTCCCTGACTGAC---
----NTGATTGACAGN
 A G T C A C G T A G T C A G T C A G T C C G A T A C T G C G T A A G T C A C G T A T C G C T G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CTCCCTGACTGAC
-----TGACTCA-
 A G T C A C G T A G T C A G T C A G T C C G A T A C T G C G T A A G T C A C G T A T C G C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CTCCCTGACTGAC----
-----TGAGTGACAGSC
 A G T C A C G T A G T C A G T C A G T C C G A T A C T G C G T A A G T C A C G T A T C G C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

FOSL1/MA0477.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTCCCTGACTGAC-
---NATGAGTCACC
 A G T C A C G T A G T C A G T C A G T C C G A T A C T G C G T A A G T C A C G T A T C G C T G A A G T C A C G T
A C G T A C G T A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCTGACTGAC
CGCCCCCTGACA---
 A C G T A C G T A G T C A C G T A G T C A G T C A G T C C G A T A C T G C G T A A G T C A C G T A T C G C T G A A G T C
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTCCCTGACTGAC
---CCAGACAG--
 A G T C A C G T A G T C A G T C A G T C C G A T A C T G C G T A A G T C A C G T A T C G C T G A A G T C
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTCCCTGACTGAC-
----ATGACTCATC
 A G T C A C G T A G T C A G T C A G T C C G A T A C T G C G T A A G T C A C G T A T C G C T G A A G T C A C G T
A C G T A C G T A C G T A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

JUNB/MA0490.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTCCCTGACTGAC--
----ATGAGTCATCN
 A G T C A C G T A G T C A G T C A G T C C G A T A C T G C G T A A G T C A C G T A T C G C T G A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

FOSL2/MA0478.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CTCCCTGACTGAC--
----NTGAGTCATCN
 A G T C A C G T A G T C A G T C A G T C C G A T A C T G C G T A A G T C A C G T A T C G C T G A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C