Information for 3-CGGCTAGGAT (Motif 12)

T G A C A T C G A C T G A G T C A C G T G C T A A T C G A C T G C G T A C G A T
Reverse Opposite:
G C T A A C G T A G T C A T G C C G A T G T C A A C T G A G T C A T G C A C T G
p-value:1e-10
log p-value:-2.343e+01
Information Content per bp:1.856
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.0 +/- 21.5bp
Average Position of motif in Background59.0 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CGGCTAGGAT------
CTACTAGGATGTNNTN
 T G A C A T C G A C T G A G T C A C G T G C T A A T C G A C T G C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGCTAGGAT
-NGCTN----
 T G A C A T C G A C T G A G T C A C G T G C T A A T C G A C T G C G T A C G A T
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGGCTAGGAT--
--GCAGTGATTT
 T G A C A T C G A C T G A G T C A C G T G C T A A T C G A C T G C G T A C G A T A C G T A C G T
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGCTAGGAT--
-TGCTGTGATTT
 T G A C A T C G A C T G A G T C A C G T G C T A A T C G A C T G C G T A C G A T A C G T A C G T
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CGGCTAGGAT---
-----NGGATTAN
 T G A C A T C G A C T G A G T C A C G T G C T A A T C G A C T G C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CGGCTAGGAT
GGGGCTYGKCTGGGA-
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C A T C G A C T G A G T C A C G T G C T A A T C G A C T G C G T A C G A T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGGCTAGGAT
AAGGCAAGTGT
 A C G T T G A C A T C G A C T G A G T C A C G T G C T A A T C G A C T G C G T A C G A T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CGGCTAGGAT---
-----NGGATTAA
 T G A C A T C G A C T G A G T C A C G T G C T A A T C G A C T G C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CGGCTAGGAT---
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T T G A C A T C G A C T G A G T C A C G T G C T A A T C G A C T G C G T A C G A T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CGGCTAGGAT
TWGTCTGV---
 A C G T T G A C A T C G A C T G A G T C A C G T G C T A A T C G A C T G C G T A C G A T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T