Information for 2-CTCAGACTTG (Motif 10)

A G T C C A G T A T G C T C G A T C A G G C T A G A T C A C G T A G C T A C T G
Reverse Opposite:
T G A C T C G A T G C A C T A G C G A T A G T C A G C T T A C G G T C A T C A G
p-value:1e-10
log p-value:-2.348e+01
Information Content per bp:1.656
Number of Target Sequences with motif95.0
Percentage of Target Sequences with motif10.03%
Number of Background Sequences with motif2294.5
Percentage of Background Sequences with motif4.89%
Average Position of motif in Targets51.0 +/- 25.5bp
Average Position of motif in Background50.9 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCAGACTTG
-BCAGACWA-
 A G T C C A G T A T G C T C G A T C A G G C T A G A T C A C G T A G C T A C T G
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

TBX1/MA0805.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCAGACTTG
-TCACACCT-
 A G T C C A G T A T G C T C G A T C A G G C T A G A T C A C G T A G C T A C T G
A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGACTTG
GCTCGGSCTC-
 A C G T A G T C C A G T A T G C T C G A T C A G G C T A G A T C A C G T A G C T A C T G
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

POL002.1_INR/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTCAGACTTG
-TCAGTCTT-
 A G T C C A G T A T G C T C G A T C A G G C T A G A T C A C G T A G C T A C T G
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCAGACTTG
-TCACACCT-
 A G T C C A G T A T G C T C G A T C A G G C T A G A T C A C G T A G C T A C T G
A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCAGACTTG-
-CCAGACRSVB
 A G T C C A G T A T G C T C G A T C A G G C T A G A T C A C G T A G C T A C T G A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCAGACTTG
-TCACACCT-
 A G T C C A G T A T G C T C G A T C A G G C T A G A T C A C G T A G C T A C T G
A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGACTTG
TGCTGTGATTT-
 A C G T A C G T A G T C C A G T A T G C T C G A T C A G G C T A G A T C A C G T A G C T A C T G
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCAGACTTG
-CCAGACAG-
 A G T C C A G T A T G C T C G A T C A G G C T A G A T C A C G T A G C T A C T G
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCAGACTTG
-TCACACCT-
 A G T C C A G T A T G C T C G A T C A G G C T A G A T C A C G T A G C T A C T G
A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T