Information for 10-CCTGTGTTCA (Motif 23)

A G T C A G T C A C G T A T C G C G A T T C A G A G C T A C G T A G T C C G T A
Reverse Opposite:
C G A T C T A G T G C A T C G A A G T C C G T A A T G C C G T A A C T G C T A G
p-value:1e-7
log p-value:-1.618e+01
Information Content per bp:1.840
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif166.7
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets41.6 +/- 32.5bp
Average Position of motif in Background49.5 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCTGTGTTCA
GCTGTG----
 A G T C A G T C A C G T A T C G C G A T T C A G A G C T A C G T A G T C C G T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCTGTGTTCA
YCTTTGTTCC
 A G T C A G T C A C G T A T C G C G A T T C A G A G C T A C G T A G T C C G T A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CCTGTGTTCA---
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A T C G C G A T T C A G A G C T A C G T A G T C C G T A A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CCTGTGTTCA---
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A T C G C G A T T C A G A G C T A C G T A G T C C G T A A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Foxo1/MA0480.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCTGTGTTCA
TCCTGTTTACA
 A C G T A G T C A G T C A C G T A T C G C G A T T C A G A G C T A C G T A G T C C G T A
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTGTGTTCA
CCTTTGTT--
 A G T C A G T C A C G T A T C G C G A T T C A G A G C T A C G T A G T C C G T A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCTGTGTTCA
GCTGTGGTTT
 A G T C A G T C A C G T A T C G C G A T T C A G A G C T A C G T A G T C C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCTGTGTTCA
NCCATTGTTC-
 A C G T A G T C A G T C A C G T A T C G C G A T T C A G A G C T A C G T A G T C C G T A
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTGTGTTCA
CCTTTGTTTT
 A G T C A G T C A C G T A T C G C G A T T C A G A G C T A C G T A G T C C G T A
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCTGTGTTCA-
-CTGTGGTTTN
 A G T C A G T C A C G T A T C G C G A T T C A G A G C T A C G T A G T C C G T A A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G