Information for 9-AATGGCAGCA (Motif 22)

C G T A C G T A C G A T C T A G A C T G A G T C C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G A T A C T G A G T C A G T C C G T A C G A T A C G T
p-value:1e-7
log p-value:-1.633e+01
Information Content per bp:1.919
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif48.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets35.0 +/- 18.3bp
Average Position of motif in Background50.2 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AATGGCAGCA
CAAGATGGCGGC-
 A C G T A C G T A C G T C G T A C G T A C G A T C T A G A C T G A G T C C G T A A C T G A G T C C G T A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AATGGCAGCA
TAATGGCGGNC
 A C G T C G T A C G T A C G A T C T A G A C T G A G T C C G T A A C T G A G T C C G T A
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AATGGCAGCA----
GATATTGACAGCTGCGT
 A C G T A C G T A C G T C G T A C G T A C G A T C T A G A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AATGGCAGCA
CAAGATGGCGGC-
 A C G T A C G T A C G T C G T A C G T A C G A T C T A G A C T G A G T C C G T A A C T G A G T C C G T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AATGGCAGCA
AAATCACAGCA
 A C G T C G T A C G T A C G A T C T A G A C T G A G T C C G T A A C T G A G T C C G T A
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AATGGCAGCA----
---GTCAGCANNTN
 C G T A C G T A C G A T C T A G A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AATGGCAGCA-----
NCTANGTCAGCAAATTT
 A C G T A C G T C G T A C G T A C G A T C T A G A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AATGGCAGCA
AAATCACTGC-
 A C G T C G T A C G T A C G A T C T A G A C T G A G T C C G T A A C T G A G T C C G T A
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AATGGCAGCA
-TTGGCA---
 C G T A C G T A C G A T C T A G A C T G A G T C C G T A A C T G A G T C C G T A
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AATGGCAGCA----
--NGTCAGCANTTT
 C G T A C G T A C G A T C T A G A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T