Information for 13-VAGGGAGGADCGC (Motif 19)

T C G A C T G A A C T G A C T G A C T G C G T A A C T G A C T G C G T A C G T A A T G C A C T G A G T C
Reverse Opposite:
A C T G A G T C A T C G G A C T A C G T A G T C G T A C A C G T A G T C A G T C A G T C A G C T A G C T
p-value:1e-8
log p-value:-1.847e+01
Information Content per bp:1.854
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif28.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets47.8 +/- 25.8bp
Average Position of motif in Background44.9 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:VAGGGAGGADCGC
--GGGAGGACNG-
 T C G A C T G A A C T G A C T G A C T G C G T A A C T G A C T G C G T A C G T A A T G C A C T G A G T C
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------VAGGGAGGADCGC
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A A C T G A C T G A C T G C G T A A C T G A C T G C G T A C G T A A T G C A C T G A G T C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----VAGGGAGGADCGC
NNNNGGGGGAAGANGG-
 A C G T A C G T A C G T A C G T T C G A C T G A A C T G A C T G A C T G C G T A A C T G A C T G C G T A C G T A A T G C A C T G A G T C
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-VAGGGAGGADCGC
RGKGGGCGGAGC--
 A C G T T C G A C T G A A C T G A C T G A C T G C G T A A C T G A C T G C G T A C G T A A T G C A C T G A G T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:VAGGGAGGADCGC
GGGGGCGGGGC--
 T C G A C T G A A C T G A C T G A C T G C G T A A C T G A C T G C G T A C G T A A T G C A C T G A G T C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------VAGGGAGGADCGC
GGAAGGAAGGAAGGAAGG-
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A A C T G A C T G A C T G C G T A A C T G A C T G C G T A C G T A A T G C A C T G A G T C
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G A C G T

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:VAGGGAGGADCGC
-GGGGNGGGGC--
 T C G A C T G A A C T G A C T G A C T G C G T A A C T G A C T G C G T A C G T A A T G C A C T G A G T C
A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---VAGGGAGGADCGC-
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T T C G A C T G A A C T G A C T G A C T G C G T A A C T G A C T G C G T A C G T A A T G C A C T G A G T C A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-VAGGGAGGADCGC--
NNAGGGACAAGGGCNC
 A C G T T C G A C T G A A C T G A C T G A C T G C G T A A C T G A C T G C G T A C G T A A T G C A C T G A G T C A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:VAGGGAGGADCGC
TGGGGAAGGGCM-
 T C G A C T G A A C T G A C T G A C T G C G T A A C T G A C T G C G T A C G T A A T G C A C T G A G T C
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T