Information for 12-GGCCAGYGCTCAG (Motif 17)

A C T G A T C G A T G C A G T C G T C A A T C G G A C T A C T G G T A C A G C T T A G C C T G A A C T G
Reverse Opposite:
G T A C G A C T A C T G C T G A A C T G G T A C C T G A A T G C A C G T A C T G A T C G A T G C A G T C
p-value:1e-8
log p-value:-2.031e+01
Information Content per bp:1.733
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif197.4
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets48.5 +/- 28.4bp
Average Position of motif in Background52.0 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGCCAGYGCTCAG---
CGAACAGTGCTCACTAT
 A C G T A C T G A T C G A T G C A G T C G T C A A T C G G A C T A C T G G T A C A G C T T A G C C T G A A C T G A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCCAGYGCTCAG
GAGGTCAAAGGTCA-
 A C G T A C G T A C T G A T C G A T G C A G T C G T C A A T C G G A C T A C T G G T A C A G C T T A G C C T G A A C T G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCCAGYGCTCAG
TAGGGCAAAGGTCA-
 A C G T A C G T A C T G A T C G A T G C A G T C G T C A A T C G G A C T A C T G G T A C A G C T T A G C C T G A A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCCAGYGCTCAG
AGGGGTCAGAGGTCA-
 A C G T A C G T A C G T A C T G A T C G A T G C A G T C G T C A A T C G G A C T A C T G G T A C A G C T T A G C C T G A A C T G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGCCAGYGCTCAG
CAGGCCNNGGCCNN-
 A C G T A C G T A C T G A T C G A T G C A G T C G T C A A T C G G A C T A C T G G T A C A G C T T A G C C T G A A C T G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGCCAGYGCTCAG
CANAGNNCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C T G A T C G A T G C A G T C G T C A A T C G G A C T A C T G G T A C A G C T T A G C C T G A A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGCCAGYGCTCAG
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T A C T G A T C G A T G C A G T C G T C A A T C G G A C T A C T G G T A C A G C T T A G C C T G A A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGCCAGYGCTCAG
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T A C T G A T C G A T G C A G T C G T C A A T C G G A C T A C T G G T A C A G C T T A G C C T G A A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGCCAGYGCTCAG
TGGGGCAAAGGTCA-
 A C G T A C G T A C T G A T C G A T G C A G T C G T C A A T C G G A C T A C T G G T A C A G C T T A G C C T G A A C T G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGCCAGYGCTCAG
TGCCAA-------
 A C T G A T C G A T G C A G T C G T C A A T C G G A C T A C T G G T A C A G C T T A G C C T G A A C T G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T