Information for 2-AGCTCGKTAK (Motif 6)

C G T A A C T G A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C G T
Reverse Opposite:
G T C A C G A T C G T A G T A C A G T C A C T G C G T A A C T G A G T C A C G T
p-value:1e-11
log p-value:-2.599e+01
Information Content per bp:1.906
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.6 +/- 12.9bp
Average Position of motif in Background67.2 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AGCTCGKTAK----
GCAACCTCATTATNNNN
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGCTCGKTAK----
NNNACCTCATTATCNTN
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGCTCGKTAK
AGCTCATTAT
 C G T A A C T G A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C G T
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCTCGKTAK
NGCTN-----
 C G T A A C T G A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCTCGKTAK----
GAAAACTAGTTAACATC
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGCTCGKTAK-
-GCTCGGSCTC
 C G T A A C T G A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C G T A C G T
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGCTCGKTAK
-GCTCCG---
 C G T A A C T G A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C G T
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCGKTAK
AAGCTTG----
 A C G T C G T A A C T G A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C G T
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCTCGKTAK--
-GCTCGTAAAAA
 C G T A A C T G A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0048.1_Hoxa13/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCTCGKTAK----
AAACCTCGTAAAATTT
 A C G T A C G T C G T A A C T G A G T C A C G T A G T C A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T