Information for 2-TTTGTATATGGGC (Motif 4)

A C G T A C G T A C G T A C T G C G A T T C G A C G A T G T C A A G C T A C T G C A T G A C T G G T A C
Reverse Opposite:
A C T G A G T C G A T C A G T C C T G A A C G T C G T A A C G T C G T A A G T C C G T A C G T A C G T A
p-value:1e-12
log p-value:-2.982e+01
Information Content per bp:1.831
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.7 +/- 28.5bp
Average Position of motif in Background67.3 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTGTATATGGGC
ATTTGCATAT----
 A C G T A C G T A C G T A C G T A C T G C G A T T C G A C G A T G T C A A G C T A C T G C A T G A C T G G T A C
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGTATATGGGC
ANTCCTTTGTCTNNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T T C G A C G A T G T C A A G C T A C T G C A T G A C T G G T A C
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTGTATATGGGC
TTTGAAACCG---
 A C G T A C G T A C G T A C T G C G A T T C G A C G A T G T C A A G C T A C T G C A T G A C T G G T A C
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTTGTATATGGGC
NNNNTTTGTTTACNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T T C G A C G A T G T C A A G C T A C T G C A T G A C T G G T A C
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTTGTATATGGGC
TTCATTTGCATAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T T C G A C G A T G T C A A G C T A C T G C A T G A C T G G T A C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTGTATATGGGC
ATTTGCATAA----
 A C G T A C G T A C G T A C G T A C T G C G A T T C G A C G A T G T C A A G C T A C T G C A T G A C T G G T A C
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTTGTATATGGGC
ATTGTTTAN----
 A C G T A C G T A C G T A C T G C G A T T C G A C G A T G T C A A G C T A C T G C A T G A C T G G T A C
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTTGTATATGGGC
CTTTGT--------
 A C G T A C G T A C G T A C G T A C T G C G A T T C G A C G A T G T C A A G C T A C T G C A T G A C T G G T A C
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTTGTATATGGGC
-TTGTTTAC----
 A C G T A C G T A C G T A C T G C G A T T C G A C G A T G T C A A G C T A C T G C A T G A C T G G T A C
A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTATATGGGC-
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T T C G A C G A T G T C A A G C T A C T G C A T G A C T G G T A C A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T