Information for 7-CTCACTTTCC (Motif 20)

G T A C C A G T G T A C T C G A G T A C A C G T A C G T A C G T T A G C G T A C
Reverse Opposite:
C A T G A T C G T G C A T G C A T G C A C A T G A G C T C A T G G T C A C A T G
p-value:1e-8
log p-value:-1.983e+01
Information Content per bp:1.662
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif5.11%
Number of Background Sequences with motif894.9
Percentage of Background Sequences with motif1.95%
Average Position of motif in Targets49.9 +/- 26.4bp
Average Position of motif in Background49.4 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC1/MA0624.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTCACTTTCC---
---ATTTTCCATT
 G T A C C A G T G T A C T C G A G T A C A C G T A C G T A C G T T A G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTCACTTTCC---
---ATTTTCCATT
 G T A C C A G T G T A C T C G A G T A C A C G T A C G T A C G T T A G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

IRF2/MA0051.1/Jaspar

Match Rank:3
Score:0.68
Offset:-8
Orientation:reverse strand
Alignment:--------CTCACTTTCC
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C A G T G T A C T C G A G T A C A C G T A C G T A C G T T A G C G T A C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTCACTTTCC
ACTTTCACTTTC-
 A C G T A C G T A C G T G T A C C A G T G T A C T C G A G T A C A C G T A C G T A C G T T A G C G T A C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTCACTTTCC---
---ATTTTCCATT
 G T A C C A G T G T A C T C G A G T A C A C G T A C G T A C G T T A G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTCACTTTCC------
-TCACTTTCACTTTCN
 G T A C C A G T G T A C T C G A G T A C A C G T A C G T A C G T T A G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTCACTTTCC
GKVTCADRTTWC
 A C G T A C G T G T A C C A G T G T A C T C G A G T A C A C G T A C G T A C G T T A G C G T A C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTCACTTTCC
AGTTTCAGTTTC-
 A C G T A C G T A C G T G T A C C A G T G T A C T C G A G T A C A C G T A C G T A C G T T A G C G T A C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTCACTTTCC
ASTTTCASTTYC-
 A C G T A C G T A C G T G T A C C A G T G T A C T C G A G T A C A C G T A C G T A C G T T A G C G T A C
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTCACTTTCC--
--CACATTCCAT
 G T A C C A G T G T A C T C G A G T A C A C G T A C G T A C G T T A G C G T A C A C G T A C G T
A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T