Information for 5-GTCTCTCTCCGTCBGT (Motif 17)

A C T G A C G T A G T C A C G T A G T C A G C T A G T C A C G T A T G C A T G C A T C G A G C T A G T C A C T G A T C G A G C T
Reverse Opposite:
C T G A A T G C T A G C A C T G C T G A A T G C A T C G A T C G C G T A A C T G C T G A A C T G C G T A A C T G G T C A A G T C
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.2 +/- 12.9bp
Average Position of motif in Background30.4 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTCTCTCTCCGTCBGT
ACCACTCTCGGTCAC-
 A C T G A C G T A G T C A C G T A G T C A G C T A G T C A C G T A T G C A T G C A T C G A G C T A G T C A C T G A T C G A G C T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTCTCTCTCCGTCBGT
CTGTCTGTCACCT-----
 A C G T A C G T A C T G A C G T A G T C A C G T A G T C A G C T A G T C A C G T A T G C A T G C A T C G A G C T A G T C A C T G A T C G A G C T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCTCTCCGTCBGT
TGTCTGDCACCT-----
 A C G T A C T G A C G T A G T C A C G T A G T C A G C T A G T C A C G T A T G C A T G C A T C G A G C T A G T C A C T G A T C G A G C T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GTCTCTCTCCGTCBGT
NNAGTCCCACTCNNNN---
 A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A G C T A G T C A C G T A T G C A T G C A T C G A G C T A G T C A C T G A T C G A G C T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.46
Offset:0
Orientation:reverse strand
Alignment:GTCTCTCTCCGTCBGT
NCTTCCCGCCC-----
 A C T G A C G T A G T C A C G T A G T C A G C T A G T C A C G T A T G C A T G C A T C G A G C T A G T C A C T G A T C G A G C T
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.46
Offset:-2
Orientation:forward strand
Alignment:--GTCTCTCTCCGTCBGT
AGGTCTCTAACC------
 A C G T A C G T A C T G A C G T A G T C A C G T A G T C A G C T A G T C A C G T A T G C A T G C A T C G A G C T A G T C A C T G A T C G A G C T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.46
Offset:0
Orientation:forward strand
Alignment:GTCTCTCTCCGTCBGT
AGTATTCTCGGTTGC-
 A C T G A C G T A G T C A C G T A G T C A G C T A G T C A C G T A T G C A T G C A T C G A G C T A G T C A C T G A T C G A G C T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.46
Offset:0
Orientation:reverse strand
Alignment:GTCTCTCTCCGTCBGT
NYTTCCCGCC------
 A C T G A C G T A G T C A C G T A G T C A G C T A G T C A C G T A T G C A T G C A T C G A G C T A G T C A C T G A T C G A G C T
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.46
Offset:0
Orientation:forward strand
Alignment:GTCTCTCTCCGTCBGT
GTCACGCTCNCTGA--
 A C T G A C G T A G T C A C G T A G T C A G C T A G T C A C G T A T G C A T G C A T C G A G C T A G T C A C T G A T C G A G C T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.46
Offset:-2
Orientation:forward strand
Alignment:--GTCTCTCTCCGTCBGT
CTGTCTGG----------
 A C G T A C G T A C T G A C G T A G T C A C G T A G T C A G C T A G T C A C G T A T G C A T G C A T C G A G C T A G T C A C T G A T C G A G C T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T