Information for 4-GAMCACCCGGCCAACC (Motif 12)

A C T G T C G A G T C A A G T C G T C A A T G C A T G C G T A C C T A G A C T G A G T C A G T C C G T A C G T A A G T C A T G C
Reverse Opposite:
A T C G A C T G C G A T C G A T A C T G A C T G T A G C A G T C A C T G A T C G A T C G A C G T A C T G A C G T A C G T A G T C
p-value:1e-10
log p-value:-2.327e+01
Information Content per bp:1.760
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.3 +/- 12.3bp
Average Position of motif in Background65.8 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAMCACCCGGCCAACC--
-TACGCCCCGCCACTCTG
 A C T G T C G A G T C A A G T C G T C A A T G C A T G C G T A C C T A G A C T G A G T C A G T C C G T A C G T A A G T C A T G C A C G T A C G T
A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GAMCACCCGGCCAACC----
----ACTATGCCAACCTACC
 A C T G T C G A G T C A A G T C G T C A A T G C A T G C G T A C C T A G A C T G A G T C A G T C C G T A C G T A A G T C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GAMCACCCGGCCAACC
--------TGCCAA--
 A C T G T C G A G T C A A G T C G T C A A T G C A T G C G T A C C T A G A C T G A G T C A G T C C G T A C G T A A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GAMCACCCGGCCAACC
GGACCACCCACG-----
 A C G T A C T G T C G A G T C A A G T C G T C A A T G C A T G C G T A C C T A G A C T G A G T C A G T C C G T A C G T A A G T C A T G C
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAMCACCCGGCCAACC
TGGCACCATGCCAA--
 A C T G T C G A G T C A A G T C G T C A A T G C A T G C G T A C C T A G A C T G A G T C A G T C C G T A C G T A A G T C A T G C
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GAMCACCCGGCCAACC
CATAAGACCACCATTAC----
 A C G T A C G T A C G T A C G T A C G T A C T G T C G A G T C A A G T C G T C A A T G C A T G C G T A C C T A G A C T G A G T C A G T C C G T A C G T A A G T C A T G C
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GAMCACCCGGCCAACC-------
---CCCCAAACCACCCCCCCCCA
 A C T G T C G A G T C A A G T C G T C A A T G C A T G C G T A C C T A G A C T G A G T C A G T C C G T A C G T A A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

PB0143.1_Klf7_2/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GAMCACCCGGCCAACC-
AAGCATACGCCCAACTT
 A C T G T C G A G T C A A G T C G T C A A T G C A T G C G T A C C T A G A C T G A G T C A G T C C G T A C G T A A G T C A T G C A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GAMCACCCGGCCAACC
------CGTGCCAAG-
 A C T G T C G A G T C A A G T C G T C A A T G C A T G C G T A C C T A G A C T G A G T C A G T C C G T A C G T A A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.49
Offset:7
Orientation:forward strand
Alignment:GAMCACCCGGCCAACC
-------ATGCCAACC
 A C T G T C G A G T C A A G T C G T C A A T G C A T G C G T A C C T A G A C T G A G T C A G T C C G T A C G T A A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C