Information for 1-TCTGACCTGAGGWGTC (Motif 1)

A G C T A G T C A C G T A C T G C T G A A T G C A G T C A G C T A C T G C G T A C T A G A C T G C G T A A T C G A C G T A G T C
Reverse Opposite:
A C T G G T C A A T G C G C A T A G T C A G T C C G A T G T A C C T G A C T A G A T C G G A C T A G T C T C G A A C T G T C G A
p-value:1e-15
log p-value:-3.564e+01
Information Content per bp:1.799
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.9 +/- 18.3bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCTGACCTGAGGWGTC
-NTGCCCANNGGTNA-
 A G C T A G T C A C G T A C T G C T G A A T G C A G T C A G C T A C T G C G T A C T A G A C T G C G T A A T C G A C G T A G T C
A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCTGACCTGAGGWGTC
-ATGCCCTGAGGC---
 A G C T A G T C A C G T A C T G C T G A A T G C A G T C A G C T A C T G C G T A C T A G A C T G C G T A A T C G A C G T A G T C
A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCTGACCTGAGGWGTC
-WTGSCCTSAGGS---
 A G C T A G T C A C G T A C T G C T G A A T G C A G T C A G C T A C T G C G T A C T A G A C T G C G T A A T C G A C G T A G T C
A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCTGACCTGAGGWGTC-
--TGWCCTCARNTGACC
 A G C T A G T C A C G T A C T G C T G A A T G C A G T C A G C T A C T G C G T A C T A G A C T G C G T A A T C G A C G T A G T C A C G T
A C G T A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TCTGACCTGAGGWGTC-----
----NTNNNAGGAGTCTCNTN
 A G C T A G T C A C G T A C T G C T G A A T G C A G T C A G C T A C T G C G T A C T A G A C T G C G T A A T C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCTGACCTGAGGWGTC
--TGACCTYA------
 A G C T A G T C A C G T A C T G C T G A A T G C A G T C A G C T A C T G C G T A C T A G A C T G C G T A A T C G A C G T A G T C
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TCTGACCTGAGGWGTC-----
-----GCGGAGGTGTCGCCTC
 A G C T A G T C A C G T A C T G C T G A A T G C A G T C A G C T A C T G C G T A C T A G A C T G C G T A A T C G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCTGACCTGAGGWGTC
-CTGACCTTTG-----
 A G C T A G T C A C G T A C T G C T G A A T G C A G T C A G C T A C T G C G T A C T A G A C T G C G T A A T C G A C G T A G T C
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCTGACCTGAGGWGTC
--TGACCT--------
 A G C T A G T C A C G T A C T G C T G A A T G C A G T C A G C T A C T G C G T A C T A G A C T G C G T A A T C G A C G T A G T C
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TCTGACCTGAGGWGTC
---NGCCTGAGGCN--
 A G C T A G T C A C G T A C T G C T G A A T G C A G T C A G C T A C T G C G T A C T A G A C T G C G T A A T C G A C G T A G T C
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T