Information for 8-TGCGCGCAAG (Motif 40)

A C G T A C T G A T G C A C T G A G T C A T C G A G T C C T G A G T C A C T A G
Reverse Opposite:
A G T C C A G T A G C T A C T G A T G C C T A G A G T C A T C G A G T C G T C A
p-value:1e-6
log p-value:-1.433e+01
Information Content per bp:1.847
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif35.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets21.7 +/- 22.2bp
Average Position of motif in Background37.5 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TGCGCGCAAG
ATAAAGGCGCGCGAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A G T C A T C G A G T C C T G A G T C A C T A G
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGCGCGCAAG
ATAAGGGCGCGCGAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A G T C A T C G A G T C C T G A G T C A C T A G
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0095.1_Zfp161_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGCGCGCAAG---
TGGCGCGCGCGCCTGA
 A C G T A C G T A C G T A C G T A C T G A T G C A C T G A G T C A T C G A G T C C T G A G T C A C T A G A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGCGCGCAAG
TTGCGTGCVA-
 A C G T A C G T A C T G A T G C A C T G A G T C A T C G A G T C C T G A G T C A C T A G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCGCGCAAG----
GCCGCGCAGTGCGT
 A C G T A C T G A T G C A C T G A G T C A T C G A G T C C T G A G T C A C T A G A C G T A C G T A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

NRF1/MA0506.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGCGCGCAAG---
--TGCGCAGGCGC
 A C G T A C T G A T G C A C T G A G T C A T C G A G T C C T G A G T C A C T A G A C G T A C G T A C G T
A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGCGCGCAAG
TTCGCGCGAAAA
 A C G T A C G T A C G T A C T G A T G C A C T G A G T C A T C G A G T C C T G A G T C A C T A G
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A

NRF(NRF)/Promoter/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGCGCGCAAG---
-GTGCGCATGCGC
 A C G T A C T G A T G C A C T G A G T C A T C G A G T C C T G A G T C A C T A G A C G T A C G T A C G T
A C G T A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCGCGCAAG
TGCGTG----
 A C G T A C T G A T G C A C T G A G T C A T C G A G T C C T G A G T C A C T A G
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGCGCGCAAG
GGCGCGCT--
 A C G T A C T G A T G C A C T G A G T C A T C G A G T C C T G A G T C A C T A G
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T