p-value: | 1e-6 |
log p-value: | -1.611e+01 |
Information Content per bp: | 1.914 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.66% |
Number of Background Sequences with motif | 3.3 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 41.5 +/- 27.0bp |
Average Position of motif in Background | 45.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCTTGGCAGGCTG--- --CTGGCAGNCTGCCA |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTTGGCAGGCTG -CTTGGCAA---- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTTGGCAGGCTG -NTTGGCANN--- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCTTGGCAGGCTG --TTGGCA----- |
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NFIA/MA0670.1/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTTGGCAGGCTG NNTTGGCANN--- |
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Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCTTGGCAGGCTG GGGGCTYGKCTGGGA- |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCTTGGCAGGCTG--- --TTGGCATGGTGCCA |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCTTGGCAGGCTG- GTCATGCHTGRCTGS |
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NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCTTGGCAGGCTG---- -CTTGGCANNNTGCCAA |
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PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTTGGCAGGCTG TGAGTGACAGSC-- |
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